RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 PCDHA12Q9UN75 941 aa18.22■□□□□ 0.51
TMEM220-202ENST00000455996 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
TMEM220-202ENST00000455996 MEIS1O00470 390 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 FOXN1O15353 648 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
TMEM220-202ENST00000455996 ANO6Q4KMQ2 910 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 CEP55Q53EZ4 464 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 CHADLQ6NUI6 762 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 RNF207Q6ZRF8 634 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 RIOX2Q8IUF8 465 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 C2orf69Q8N8R5 385 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
TMEM220-202ENST00000455996 ACAD9Q9H845 621 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 ZNF408Q9H9D4 720 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 MAGEF1Q9HAY2 307 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 HOMER2Q9NSB8 354 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 SLC45A1Q9Y2W3 748 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 PCDHA5Q9Y5H7 936 aa18.21■□□□□ 0.51
TMEM220-202ENST00000455996 MSH4O15457 936 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 CELF2O95319 508 aaKnown RBP18.2■□□□□ 0.5
TMEM220-202ENST00000455996 BCRP11274 1271 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 ZNF76P36508 570 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 STAT6P42226 847 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 NLRP12P59046 1061 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 HERVK_113P62684 666 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 SETQ01105 290 aaPredicted RBP18.2■□□□□ 0.5
TMEM220-202ENST00000455996 SPIRE1Q08AE8 756 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 HYIQ5T013 277 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 RRAGBQ5VZM2 374 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 PCNX4Q63HM2 1172 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 XRRA1Q6P2D8 792 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.2■□□□□ 0.5
TMEM220-202ENST00000455996 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.2■□□□□ 0.5
TMEM220-202ENST00000455996 BTBD7Q9P203 1132 aa18.2■□□□□ 0.5
TMEM220-202ENST00000455996 MARCH6O60337 910 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 CNMDO75829 334 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 PRR29P0C7W0 189 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 DPYDQ12882 1025 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 BAATQ14032 418 aaPredicted RBP18.19■□□□□ 0.5
TMEM220-202ENST00000455996 TRIML1Q8N9V2 468 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 CYP2W1Q8TAV3 490 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 SLC5A5Q92911 643 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 MS4A4AQ96JQ5 239 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 TAAR1Q96RJ0 339 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 MTRQ99707 1265 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 MXRA8Q9BRK3 442 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 KBTBD4Q9NVX7 518 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 FBXO40Q9UH90 709 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 STK24Q9Y6E0 443 aa18.19■□□□□ 0.5
TMEM220-202ENST00000455996 GTPBP6O43824 516 aaPredicted RBP18.18■□□□□ 0.5
TMEM220-202ENST00000455996 SMC2O95347 1197 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 MYL1P05976 194 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 CETPP11597 493 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 PLCG1P19174 1290 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 OSBPP22059 807 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 GTF2A2P52657 109 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 GRB10Q13322 594 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 TMEM119Q4V9L6 283 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 CST9Q5W186 159 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 KRT79Q5XKE5 535 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 NSMFQ6X4W1 530 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 PLA2G4DQ86XP0 818 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 GRAMD1CQ8IYS0 662 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 RNF214Q8ND24 703 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 LRRC15Q8TF66 581 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 CALML4Q96GE6 196 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 PNMA5Q96PV4 448 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 SPATC1LQ9H0A9 340 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 PXMP2Q9NR77 195 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 CYP39A1Q9NYL5 469 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 VAV3Q9UKW4 847 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 UBIAD1Q9Y5Z9 338 aa18.18■□□□□ 0.5
TMEM220-202ENST00000455996 POTEMA6NI47 508 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 ZBTB48P10074 688 aaPredicted RBP18.17■□□□□ 0.5
TMEM220-202ENST00000455996 COPB2P35606 906 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 C11orf57Q6ZUT1 292 aaPredicted RBP18.17■□□□□ 0.5
TMEM220-202ENST00000455996 IL31RAQ8NI17 732 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 GTF3C2Q8WUA4 911 aaPredicted RBP18.17■□□□□ 0.5
TMEM220-202ENST00000455996 SMARCE1Q969G3 411 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 BPIFA3Q9BQP9 254 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 PDCD2LQ9BRP1 358 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 CBX8Q9HC52 389 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 A1CFQ9NQ94 594 aaKnown RBP18.17■□□□□ 0.5
TMEM220-202ENST00000455996 STK17AQ9UEE5 414 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 MAN1B1Q9UKM7 699 aa18.17■□□□□ 0.5
TMEM220-202ENST00000455996 PSMD10O75832 226 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 ITGB5P18084 799 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 ZNF165P49910 485 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 UBXN2AP68543 259 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 MRPS9P82933 396 aaKnown RBP18.16■□□□□ 0.5
TMEM220-202ENST00000455996 SEMA3FQ13275 785 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 MORC3Q14149 939 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 IQCB1Q15051 598 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 PGM5Q15124 567 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 ZRSR1Q15695 479 aaKnown RBP18.16■□□□□ 0.5
TMEM220-202ENST00000455996 SPRYD7Q5W111 196 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 SNX29Q8TEQ0 813 aa18.16■□□□□ 0.5
TMEM220-202ENST00000455996 GJA10Q969M2 543 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms