RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 hCG_1984214I3L0E3 225 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 ARVCFO00192 962 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 KIAA0355O15063 1070 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 NR3C2P08235 984 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 ITGB8P26012 769 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 TOB2Q14106 344 aaPredicted RBP19.98■□□□□ 0.79
USP39-208ENST00000455732 PPP1R18Q6NYC8 613 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 CXCL17Q6UXB2 119 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 ZNF713Q8N859 430 aaPredicted RBP19.98■□□□□ 0.79
USP39-208ENST00000455732 UPF3BQ9BZI7 483 aaKnown RBP19.98■□□□□ 0.79
USP39-208ENST00000455732 MROH7Q68CQ1 1323 aa19.98■□□□□ 0.79
USP39-208ENST00000455732 hCG_1642624A0A1W2PR95 340 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 DCDC2CA8MYV0 355 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 MEIS2O14770 477 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 EIF3JO75822 258 aaKnown RBP19.97■□□□□ 0.79
USP39-208ENST00000455732 CABYRO75952 493 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 ADD1P35611 737 aaKnown RBP19.97■□□□□ 0.79
USP39-208ENST00000455732 CCDC62Q6P9F0 684 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 SLC43A3Q8NBI5 491 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 BADQ92934 168 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 CUL5Q93034 780 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 VTI1AQ96AJ9 217 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 LRCH3Q96II8 777 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 NAP1L2Q9ULW6 460 aaPredicted RBP19.97■□□□□ 0.79
USP39-208ENST00000455732 GRIN2DO15399 1336 aa19.97■□□□□ 0.79
USP39-208ENST00000455732 ZEB2O60315 1214 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 ARIH2O95376 493 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 PDIA3P30101 505 aaKnown RBP19.96■□□□□ 0.79
USP39-208ENST00000455732 TTLL4Q14679 1199 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 PGM5Q15124 567 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 LRIT3Q3SXY7 679 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 WWC2Q6AWC2 1192 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 HEATR3Q7Z4Q2 680 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 VSIG10LQ86VR7 867 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 FAM126BQ8IXS8 530 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 PSTPIP2Q9H939 334 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 TBX21Q9UL17 535 aa19.96■□□□□ 0.79
USP39-208ENST00000455732 COL6A3P12111 3177 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
USP39-208ENST00000455732 USP17L6PQ6QN14 398 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 FCHSD1Q86WN1 690 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 OR6J1Q8NGC5 347 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 IL31RAQ8NI17 732 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 COPS5Q92905 334 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 GPKOWQ92917 476 aaPredicted RBP eCLIP19.95■□□□□ 0.78
USP39-208ENST00000455732 ZNF274Q96GC6 653 aaPredicted RBP19.95■□□□□ 0.78
USP39-208ENST00000455732 ALDH8A1Q9H2A2 487 aaPredicted RBP19.95■□□□□ 0.78
USP39-208ENST00000455732 PDRG1Q9NUG6 133 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 TMEM39AQ9NV64 488 aa19.95■□□□□ 0.78
USP39-208ENST00000455732 V9GY48 417 aaPredicted RBP19.95■□□□□ 0.78
USP39-208ENST00000455732 A6NJR5 290 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 SEC24BO95487 1268 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 CD4P01730 458 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 CCND2P30279 289 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 CPT1AP50416 773 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 PURAQ00577 322 aaKnown RBP19.94■□□□□ 0.78
USP39-208ENST00000455732 NTRK3Q16288 839 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 C8orf34Q49A92 452 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 SEPT14Q6ZU15 432 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 SMARCC2Q8TAQ2 1214 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 BARHL2Q9NY43 387 aa19.94■□□□□ 0.78
USP39-208ENST00000455732 STXBP3O00186 592 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 STAM2O75886 525 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 RGS20O76081 388 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 RAG1P15918 1043 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 ITGA7Q13683 1181 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 PFKFB3Q16875 520 aaPredicted RBP19.93■□□□□ 0.78
USP39-208ENST00000455732 TYW1BQ6NUM6 668 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 XRRA1Q6P2D8 792 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 KCNV1Q6PIU1 500 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 SEZ6LQ9BYH1 1024 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 POLR3EQ9NVU0 708 aa19.93■□□□□ 0.78
USP39-208ENST00000455732 PRPF3O43395 683 aaKnown RBP19.92■□□□□ 0.78
USP39-208ENST00000455732 MYCLP12524 364 aaPredicted RBP19.92■□□□□ 0.78
USP39-208ENST00000455732 SCG2P13521 617 aa19.92■□□□□ 0.78
USP39-208ENST00000455732 IFNAR1P17181 557 aa19.92■□□□□ 0.78
USP39-208ENST00000455732 NAPAP54920 295 aa19.92■□□□□ 0.78
USP39-208ENST00000455732 PSMC6P62333 389 aa19.92■□□□□ 0.78
USP39-208ENST00000455732 LY6KQ17RY6 165 aa19.92■□□□□ 0.78
USP39-208ENST00000455732 EMID1Q96A84 441 aaPredicted RBP19.92■□□□□ 0.78
USP39-208ENST00000455732 RNF26Q9BY78 433 aaPredicted RBP19.92■□□□□ 0.78
USP39-208ENST00000455732 DDX41Q9UJV9 622 aaKnown RBP19.92■□□□□ 0.78
USP39-208ENST00000455732 DOCK5Q9H7D0 1870 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 TIMP1P01033 207 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 ARHGAP1Q07960 439 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 BRDTQ58F21 947 aaPredicted RBP19.91■□□□□ 0.78
USP39-208ENST00000455732 PCNX4Q63HM2 1172 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 GPR153Q6NV75 609 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 INPP4AQ96PE3 977 aaPredicted RBP19.91■□□□□ 0.78
USP39-208ENST00000455732 GLT8D2Q9H1C3 349 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 RIC8AQ9NPQ8 531 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 MRVI1Q9Y6F6 885 aa19.91■□□□□ 0.78
USP39-208ENST00000455732 TLR3O15455 904 aaKnown RBP19.9■□□□□ 0.78
USP39-208ENST00000455732 GH1P01241 217 aa19.9■□□□□ 0.78
USP39-208ENST00000455732 MYL3P08590 195 aa19.9■□□□□ 0.78
USP39-208ENST00000455732 TGFB3P10600 412 aa19.9■□□□□ 0.78
USP39-208ENST00000455732 MRPS9P82933 396 aaKnown RBP19.9■□□□□ 0.78
USP39-208ENST00000455732 SHHQ15465 462 aa19.9■□□□□ 0.78
USP39-208ENST00000455732 PKN1Q16512 942 aa19.9■□□□□ 0.78
USP39-208ENST00000455732 C9orf50Q5SZB4 431 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms