RNA–Protein interactions for RNA: ENST00000455079.5

ATG9A-216, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-216ENST00000455079 GLT1D1Q96MS3 346 aa20.36■□□□□ 0.85
ATG9A-216ENST00000455079 FRMPD4Q14CM0 1322 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 STXBP3O00186 592 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 ZEB2O60315 1214 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 RGS20O76081 388 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 NTRK3Q16288 839 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 CXCL17Q6UXB2 119 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 PHKBQ93100 1093 aa20.35■□□□□ 0.85
ATG9A-216ENST00000455079 ZNF274Q96GC6 653 aaPredicted RBP20.35■□□□□ 0.85
ATG9A-216ENST00000455079 ELP1O95163 1332 aa20.34■□□□□ 0.85
ATG9A-216ENST00000455079 PRPF3O43395 683 aaKnown RBP20.34■□□□□ 0.85
ATG9A-216ENST00000455079 TLE2Q04725 743 aa20.34■□□□□ 0.85
ATG9A-216ENST00000455079 STK3Q13188 491 aa20.34■□□□□ 0.85
ATG9A-216ENST00000455079 PFKFB3Q16875 520 aaPredicted RBP20.34■□□□□ 0.85
ATG9A-216ENST00000455079 IL17RAQ96F46 866 aa20.34■□□□□ 0.85
ATG9A-216ENST00000455079 BARHL2Q9NY43 387 aa20.34■□□□□ 0.85
ATG9A-216ENST00000455079 DDX41Q9UJV9 622 aaKnown RBP20.34■□□□□ 0.85
ATG9A-216ENST00000455079 MRVI1Q9Y6F6 885 aa20.34■□□□□ 0.85
ATG9A-216ENST00000455079 DOCK5Q9H7D0 1870 aa20.34■□□□□ 0.85
ATG9A-216ENST00000455079 hCG_1984214I3L0E3 225 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 GH1P01241 217 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 MYL3P08590 195 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 SCG2P13521 617 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 MRPS9P82933 396 aaKnown RBP20.33■□□□□ 0.85
ATG9A-216ENST00000455079 PKN1Q16512 942 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 PPP1R18Q6NYC8 613 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 CHRDL2Q6WN34 429 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 ZNF713Q8N859 430 aaPredicted RBP20.33■□□□□ 0.85
ATG9A-216ENST00000455079 SLC26A6Q9BXS9 759 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 ALDH8A1Q9H2A2 487 aaPredicted RBP20.33■□□□□ 0.85
ATG9A-216ENST00000455079 RIC8AQ9NPQ8 531 aa20.33■□□□□ 0.85
ATG9A-216ENST00000455079 COLQQ9Y215 455 aaPredicted RBP20.33■□□□□ 0.85
ATG9A-216ENST00000455079 A0A0U1RQG5 324 aaPredicted RBP20.32■□□□□ 0.84
ATG9A-216ENST00000455079 SMCO2A6NFE2 343 aa20.32■□□□□ 0.84
ATG9A-216ENST00000455079 IFNAR1P17181 557 aa20.32■□□□□ 0.84
ATG9A-216ENST00000455079 CPT1AP50416 773 aa20.32■□□□□ 0.84
ATG9A-216ENST00000455079 AKAP17AQ02040 695 aaKnown RBP20.32■□□□□ 0.84
ATG9A-216ENST00000455079 ARHGAP1Q07960 439 aa20.32■□□□□ 0.84
ATG9A-216ENST00000455079 RTEL1Q9NZ71 1219 aa20.32■□□□□ 0.84
ATG9A-216ENST00000455079 PCDHA6Q9UN73 950 aa20.32■□□□□ 0.84
ATG9A-216ENST00000455079 PCDHA8Q9Y5H6 950 aa20.32■□□□□ 0.84
ATG9A-216ENST00000455079 A6NJR5 290 aa20.31■□□□□ 0.84
ATG9A-216ENST00000455079 PQBP1O60828 265 aaKnown RBP20.31■□□□□ 0.84
ATG9A-216ENST00000455079 CABYRO75952 493 aa20.31■□□□□ 0.84
ATG9A-216ENST00000455079 ADCY7P51828 1080 aa20.31■□□□□ 0.84
ATG9A-216ENST00000455079 AK2P54819 239 aa20.31■□□□□ 0.84
ATG9A-216ENST00000455079 PSMC6P62333 389 aa20.31■□□□□ 0.84
ATG9A-216ENST00000455079 BRDTQ58F21 947 aaPredicted RBP20.31■□□□□ 0.84
ATG9A-216ENST00000455079 RNF26Q9BY78 433 aaPredicted RBP20.31■□□□□ 0.84
ATG9A-216ENST00000455079 PRDM5Q9NQX1 630 aaPredicted RBP20.31■□□□□ 0.84
ATG9A-216ENST00000455079 POLR3EQ9NVU0 708 aa20.31■□□□□ 0.84
ATG9A-216ENST00000455079 RBM27Q9P2N5 1060 aaKnown RBP20.31■□□□□ 0.84
ATG9A-216ENST00000455079 SPDYE3A6NKU9 549 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 ARVCFO00192 962 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 SORBS3O60504 671 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 CDK7P50613 346 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 PURAQ00577 322 aaKnown RBP20.3■□□□□ 0.84
ATG9A-216ENST00000455079 HABP4Q5JVS0 413 aaKnown RBP20.3■□□□□ 0.84
ATG9A-216ENST00000455079 PCNX4Q63HM2 1172 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 KCNV1Q6PIU1 500 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 SH3RF1Q7Z6J0 888 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 AFG1LQ8WV93 481 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 PGBD1Q96JS3 809 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 PDLIM7Q9NR12 457 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 PRKAG2Q9UGJ0 569 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 TPCN1Q9ULQ1 816 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
ATG9A-216ENST00000455079 GRIN2DO15399 1336 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 CPLX1O14810 134 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 STAM2O75886 525 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 MAGEA10P43363 369 aaPredicted RBP20.29■□□□□ 0.84
ATG9A-216ENST00000455079 NEK4P51957 841 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 SP2Q02086 613 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
ATG9A-216ENST00000455079 ITGA7Q13683 1181 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 GNPTABQ3T906 1256 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 ANKRD33Q7Z3H0 272 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 DHX37Q8IY37 1157 aaKnown RBP20.29■□□□□ 0.84
ATG9A-216ENST00000455079 TOX2Q96NM4 488 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 SLKQ9H2G2 1235 aaPredicted RBP20.29■□□□□ 0.84
ATG9A-216ENST00000455079 TMEM260Q9NX78 707 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 LTBP2Q14767 1821 aa20.29■□□□□ 0.84
ATG9A-216ENST00000455079 TRIM43BA6NCK2 446 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 DCDC2CA8MYV0 355 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 MMP3P08254 477 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 CLTBP09497 229 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 ICAM3P32942 547 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 MDM2Q00987 491 aaPredicted RBP20.28■□□□□ 0.84
ATG9A-216ENST00000455079 SCRN1Q12765 414 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 SEMA3FQ13275 785 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 LAMC2Q13753 1193 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 ANKRD1Q15327 319 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 XRRA1Q6P2D8 792 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 SLC43A3Q8NBI5 491 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 TRIM43Q96BQ3 446 aaPredicted RBP20.28■□□□□ 0.84
ATG9A-216ENST00000455079 INPP4AQ96PE3 977 aaPredicted RBP20.28■□□□□ 0.84
ATG9A-216ENST00000455079 GDF15Q99988 308 aa20.28■□□□□ 0.84
ATG9A-216ENST00000455079 MTG1Q9BT17 334 aaPredicted RBP20.28■□□□□ 0.84
ATG9A-216ENST00000455079 GLT8D2Q9H1C3 349 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms