RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TMEM260Q9NX78 707 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 RWDD2AQ9UIY3 292 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 ZNF536O15090 1300 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 SHTN1A0MZ66 631 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 BICDL2A1A5D9 508 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 MEIS1O00470 390 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 VWA5AO00534 786 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 OPLAHO14841 1288 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 EDIL3O43854 480 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 FGFR1OPO95684 399 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 RPA1P27694 616 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 EPHX2P34913 555 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 ZNF75DP51815 510 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 DPCR1Q3MIW9 517 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 KIAA1755Q5JYT7 1200 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 SPATA1Q5VX52 437 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 RASGRP2Q7LDG7 609 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 ZSCAN30Q86W11 494 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 FAM43AQ8N2R8 423 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 ANKRD20A12PQ8NF67 263 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 RASSF8Q8NHQ8 419 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 HAS1Q92839 578 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 NUP88Q99567 741 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 PANK2Q9BZ23 570 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 RPAP3Q9H6T3 665 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 KCNH4Q9UQ05 1017 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 PFASO15067 1338 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 SPDYE5A6NIY4 337 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 FLOT1O75955 427 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 DDNO94850 711 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 RPN1P04843 607 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 YBX3P16989 372 aaKnown RBP eCLIP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 SCP2P22307 547 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 INPP5BP32019 993 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 ZNF76P36508 570 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 SPP2Q13103 211 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 MTMR2Q13614 643 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 UBE2SQ16763 222 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 SHROOM1Q2M3G4 852 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 CEP55Q53EZ4 464 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 C11orf57Q6ZUT1 292 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 LUZP1Q86V48 1076 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 SPICE1Q8N0Z3 855 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 CLEC4DQ8WXI8 215 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 LARP4BQ92615 738 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 IQCDQ96DY2 449 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 IWS1Q96ST2 819 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 TIPINQ9BVW5 301 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 TEX13BQ9BXU2 312 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 TBC1D22BQ9NU19 505 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 ZHX2Q9Y6X8 837 aa7.67□□□□□ -1.18
ECHDC1-210ENST00000454859 IGLV3-22A0A075B6J6 115 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 A0A087X0B3 334 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 ADAMTS3O15072 1205 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 SLC37A4O43826 429 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 NRDCO43847 1150 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 DKC1O60832 514 aaKnown RBP eCLIP7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 TDP2O95551 362 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 PLCG1P19174 1290 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 TECP42680 631 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 TXKP42681 527 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 NAALADL2Q58DX5 795 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L6PQ6QN14 398 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 USP49Q70CQ1 688 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 UNC13DQ70J99 1090 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 FAM114A1Q8IWE2 563 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 GIMAP8Q8ND71 665 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 REPS2Q8NFH8 660 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 DNERQ8NFT8 737 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 RAD54LQ92698 747 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 LENG9Q96B70 501 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 MPHOSPH6Q99547 160 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 MMTAG2Q9BU76 263 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 TRIM5Q9C035 493 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 TANGO6Q9C0B7 1094 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 A0A0G2JLL6 359 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 PSMA7O14818 248 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 SLC25A27O95847 323 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 ZNF18P17022 549 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 SFNP31947 248 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 ABCD1P33897 745 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 KCNJ6P48051 423 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 CUL4BQ13620 913 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 NCAPHQ15003 741 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 USH1GQ495M9 461 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 PRRT2Q7Z6L0 340 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 CDAN1Q8IWY9 1227 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 AOPEPQ8N6M6 819 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 PDILTQ8N807 584 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 SNX29Q8TEQ0 813 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 GPRASP2Q96D09 838 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 SENP7Q9BQF6 1050 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 MXRA8Q9BRK3 442 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 TRIM9Q9C026 710 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 TAF1DQ9H5J8 278 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
ECHDC1-210ENST00000454859 LRRC10BA6NIK2 292 aa7.65□□□□□ -1.18
ECHDC1-210ENST00000454859 LYPLA2O95372 231 aa7.65□□□□□ -1.18
ECHDC1-210ENST00000454859 SPIRE1Q08AE8 756 aa7.65□□□□□ -1.18
ECHDC1-210ENST00000454859 GRB10Q13322 594 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms