RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 NEK4P51957 841 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 ACLYP53396 1101 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 PRPF38BQ5VTL8 546 aaKnown RBP16.28■□□□□ 0.2
HDAC4-205ENST00000454542 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 XRRA1Q6P2D8 792 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 PCSK9Q8NBP7 692 aaKnown RBP16.28■□□□□ 0.2
HDAC4-205ENST00000454542 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 SENP6Q9GZR1 1112 aaPredicted RBP16.28■□□□□ 0.2
HDAC4-205ENST00000454542 ZMYND12Q9H0C1 365 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 GLT8D2Q9H1C3 349 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 DNAH12Q6ZR08 3092 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 ICAM3P32942 547 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 ADCY7P51828 1080 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 ARHGAP1Q07960 439 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 ST3GAL1Q11201 340 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 STK3Q13188 491 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 AP3B2Q13367 1082 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 KCNA10Q16322 511 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 FSCN1Q16658 493 aaKnown RBP16.27■□□□□ 0.2
HDAC4-205ENST00000454542 ME3Q16798 604 aa16.27■□□□□ 0.2
HDAC4-205ENST00000454542 FAM177A1Q8N128 213 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-205ENST00000454542 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-205ENST00000454542 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-205ENST00000454542 SLKQ9H2G2 1235 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-205ENST00000454542 DDX41Q9UJV9 622 aaKnown RBP16.27■□□□□ 0.2
HDAC4-205ENST00000454542 SMCO2A6NFE2 343 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 DEXIO95424 95 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 CTDNEP1O95476 244 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 ASGR1P07306 291 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 TXNP10599 105 aaKnown RBP16.26■□□□□ 0.19
HDAC4-205ENST00000454542 BEX3Q00994 111 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 SEMA3FQ13275 785 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
HDAC4-205ENST00000454542 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 SEPT14Q6ZU15 432 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 CCDC148Q8NFR7 591 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 OR6J1Q8NGC5 347 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 COPS5Q92905 334 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 AP5M1Q9H0R1 490 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 PCDHA6Q9UN73 950 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 PCDHA8Q9Y5H6 950 aa16.26■□□□□ 0.19
HDAC4-205ENST00000454542 ELP1O95163 1332 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 A6NJR5 290 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 SPDYE3A6NKU9 549 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 CPLX1O14810 134 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 DYNC1LI2O43237 492 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 CDKL5O76039 1030 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 HOXD8P13378 290 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 UBA1P22314 1058 aaKnown RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 CPT1AP50416 773 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 RTP1P59025 263 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 AKAP17AQ02040 695 aaKnown RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 SSRP1Q08945 709 aaKnown RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 GNASQ5JWF2 1037 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 KCNV1Q6PIU1 500 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 NOL8Q76FK4 1167 aaKnown RBP16.25■□□□□ 0.19
HDAC4-205ENST00000454542 CRYGNQ8WXF5 182 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 TBC1D32Q96NH3 1257 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 ANO3Q9BYT9 981 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 MRVI1Q9Y6F6 885 aa16.25■□□□□ 0.19
HDAC4-205ENST00000454542 MYH7BA7E2Y1 1941 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 PPFIA3O75145 1194 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 CABYRO75952 493 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 GH1P01241 217 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-205ENST00000454542 TGFB3P10600 412 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 SREBF1P36956 1147 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 ATN1P54259 1190 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-205ENST00000454542 RABEP1Q15276 862 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 NPY5RQ15761 445 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 LY6KQ17RY6 165 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 GNPTABQ3T906 1256 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 SLC43A3Q8NBI5 491 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 IL27Q8NEV9 243 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 EHMT1Q9H9B1 1298 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 STARD7Q9NQZ5 370 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 VPS54Q9P1Q0 977 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 UBIAD1Q9Y5Z9 338 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 DOCK5Q9H7D0 1870 aa16.24■□□□□ 0.19
HDAC4-205ENST00000454542 FIBPO43427 364 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 ZEB2O60315 1214 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 EVI5O60447 810 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 MMP3P08254 477 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 PURAQ00577 322 aaKnown RBP16.23■□□□□ 0.19
HDAC4-205ENST00000454542 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 C7orf61Q8IZ16 206 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 REXO1Q8N1G1 1221 aaKnown RBP16.23■□□□□ 0.19
HDAC4-205ENST00000454542 DAGLBQ8NCG7 672 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 NSUN7Q8NE18 718 aaKnown RBP16.23■□□□□ 0.19
HDAC4-205ENST00000454542 DPF3Q92784 378 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 GPRASP2Q96D09 838 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 GLT1D1Q96MS3 346 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms