RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 GKAP1Q5VSY0 366 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 YY1AP1Q9H869 796 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 SLC24A3Q9HC58 644 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 TSKSQ9UJT2 592 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 WTIPA6NIX2 430 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 ABCB4P21439 1286 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 MDH1P40925 334 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 CALCRLQ16602 461 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 GIMAP8Q8ND71 665 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 HAUS2Q9NVX0 235 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 EPHB6O15197 1021 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 GNA11P29992 359 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 ANKS4BQ8N8V4 417 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 CNTNAP5Q8WYK1 1306 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 DHX9Q08211 1270 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 TRIM28Q13263 835 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 ANKIB1Q9P2G1 1089 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 PPP2R5AQ15172 486 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 TRMT1LQ7Z2T5 733 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 MAPKAPK5Q8IW41 473 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 MSL3Q8N5Y2 521 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 SLC44A5Q8NCS7 719 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 TBCKQ8TEA7 893 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 SUFUQ9UMX1 484 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 POTEMA6NI47 508 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 ADAMTS3O15072 1205 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 CTNND1O60716 968 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 MAGOHP61326 146 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 MYOCDQ8IZQ8 938 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 MAGOHBQ96A72 148 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 DUSP9Q99956 384 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 WDR17Q8IZU2 1322 aa15.24■□□□□ 0.03
UBE2D3-210ENST00000453744 PHF20L1A8MW92 1017 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 RAD51CO43502 376 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 RHOBTB3O94955 611 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 PTGISQ16647 500 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 NEK8Q86SG6 692 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 RPAINQ86UA6 219 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 CD2APQ9Y5K6 639 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 A0A1B0GUA9 196 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 ZNF263O14978 683 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 KLRC1P26715 233 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 PEX19P40855 299 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 SLCO1A2P46721 670 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 FAM133BQ5BKY9 247 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 SUGP1Q8IWZ8 645 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 GPCPD1Q9NPB8 672 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 EIF4E1BA6NMX2 242 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 IFI16Q16666 785 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 CCDC13Q8IYE1 715 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 REXO1Q8N1G1 1221 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 CASKIN2Q8WXE0 1202 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 LARP4BQ92615 738 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 SAMD15Q9P1V8 674 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 STK38LQ9Y2H1 464 aa15.23■□□□□ 0.03
UBE2D3-210ENST00000453744 GMNCA6NCL1 334 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 HMGB1P1B2RPK0 211 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 USP17L2Q6R6M4 530 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 KRT25Q7Z3Z0 450 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 CCDC26Q8TAB7 109 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 ZNF507Q8TCN5 953 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 SHISA4Q96DD7 197 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 GGT7Q9UJ14 662 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 UTP11Q9Y3A2 253 aaKnown RBP15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 PRDX5P30044 214 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 FAM83BQ5T0W9 1011 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 MPHOSPH10O00566 681 aaKnown RBP15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 PPP1R2P41236 205 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 KCNB1Q14721 858 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 WHAMMQ8TF30 809 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 TLR10Q9BXR5 811 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 SLC40A1Q9NP59 571 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 PNPLA7Q6ZV29 1317 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 LRRC37A3O60309 1634 aa15.22■□□□□ 0.03
UBE2D3-210ENST00000453744 ZFYVE27Q5T4F4 411 aa15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 FRMPD2Q68DX3 1309 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 TBC1D1Q86TI0 1168 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 PAIP2Q9BPZ3 127 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 PLA2G12BQ9BX93 195 aa15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 KCNK9Q9NPC2 374 aa15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 FBXL5Q9UKA1 691 aa15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 DAPK3O43293 454 aa15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 CYFIP2Q96F07 1278 aa15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 RSRC1Q96IZ7 334 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-210ENST00000453744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.031e-7■■■■■ 61.1
UBE2D3-210ENST00000453744 MYH8P13535 1937 aa15.21■□□□□ 0.02
UBE2D3-210ENST00000453744 ZNF233A6NK53 670 aa15.21■□□□□ 0.02
UBE2D3-210ENST00000453744 PDHBP11177 359 aa15.21■□□□□ 0.02
UBE2D3-210ENST00000453744 FAM26FQ5R3K3 315 aa15.21■□□□□ 0.02
UBE2D3-210ENST00000453744 MDM1Q8TC05 714 aa15.21■□□□□ 0.02
UBE2D3-210ENST00000453744 GJA10Q969M2 543 aa15.21■□□□□ 0.02
UBE2D3-210ENST00000453744 PACSIN1Q9BY11 444 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms