RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 FCHSD1Q86WN1 690 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 TEX2Q8IWB9 1127 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 TRIM43Q96BQ3 446 aaPredicted RBP18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 PSTPIP2Q9H939 334 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 STARD7Q9NQZ5 370 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 PDLIM7Q9NR12 457 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 CYP46A1Q9Y6A2 500 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 STXBP3O00186 592 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 ARVCFO00192 962 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 CABYRO75952 493 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 ITGB8P26012 769 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 MAGEA10P43363 369 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 METAP2P50579 478 aaKnown RBP eCLIP18.57■□□□□ 0.564e-7■■□□□ 12
SCAMP4-205ENST00000452128 SP2Q02086 613 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 FAAP100Q0VG06 881 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 SEMA3FQ13275 785 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 LY6KQ17RY6 165 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 GPKOWQ92917 476 aaPredicted RBP eCLIP18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 EMID1Q96A84 441 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 ZNF274Q96GC6 653 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 GLT1D1Q96MS3 346 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 INPP4AQ96PE3 977 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 ATP11BQ9Y2G3 1177 aa18.57■□□□□ 0.56
SCAMP4-205ENST00000452128 CCDC196A0A1B0GTZ2 297 aa18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 KIAA0355O15063 1070 aa18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 PRPF3O43395 683 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 CD4P01730 458 aa18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 HOXD8P13378 290 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 ICAM3P32942 547 aa18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 PURAQ00577 322 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 BARHL2Q9NY43 387 aa18.56■□□□□ 0.56
SCAMP4-205ENST00000452128 A0A0U1RQG5 324 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 ADAMTS3O15072 1205 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 TGFB3P10600 412 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 IFNAR1P17181 557 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 PFKFB3Q16875 520 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 C8orf34Q49A92 452 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 XRRA1Q6P2D8 792 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 OR6J1Q8NGC5 347 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 ZFP91Q96JP5 570 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 BCAS3Q9H6U6 928 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 RIC8AQ9NPQ8 531 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 TBX21Q9UL17 535 aa18.55■□□□□ 0.56
SCAMP4-205ENST00000452128 SPATA31C2B4DYI2 1134 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 ZEB2O60315 1214 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 MYCLP12524 364 aaPredicted RBP18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 CCND2P30279 289 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 CLK2P49760 499 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 FGD1P98174 961 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 PCNX4Q63HM2 1172 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 PPP1R18Q6NYC8 613 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 HEATR3Q7Z4Q2 680 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 FAM126BQ8IXS8 530 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 AFG1LQ8WV93 481 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 NCOA5Q9HCD5 579 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 PDRG1Q9NUG6 133 aa18.54■□□□□ 0.56
SCAMP4-205ENST00000452128 hCG_1984214I3L0E3 225 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 STAM2O75886 525 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 GH1P01241 217 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 CPT1AP50416 773 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 ITGA7Q13683 1181 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 UBE2SQ16763 222 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 CELF3Q5SZQ8 465 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 MYSM1Q5VVJ2 828 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 ZNF713Q8N859 430 aaPredicted RBP18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 KAT2BQ92831 832 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 SEZ6LQ9BYH1 1024 aa18.53■□□□□ 0.56
SCAMP4-205ENST00000452128 A0A1W2PPC1 479 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 KPNA6O60684 536 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 PQBP1O60828 265 aaKnown RBP18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 CLTBP09497 229 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 SCG2P13521 617 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 PSMC6P62333 389 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 SMARCC2Q8TAQ2 1214 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 CUL5Q93034 780 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 PHKBQ93100 1093 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 POLR3EQ9NVU0 708 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 PCDHA6Q9UN73 950 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 PCDHA8Q9Y5H6 950 aa18.52■□□□□ 0.56
SCAMP4-205ENST00000452128 KIAA1217Q5T5P2 1943 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 ESYT2A0FGR8 921 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 MMP3P08254 477 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 ITGB5P18084 799 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 UBA1P22314 1058 aaKnown RBP18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 CCT2P78371 535 aaKnown RBP18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 LAMC2Q13753 1193 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 PPTC7Q8NI37 304 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 CRYGNQ8WXF5 182 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 MTG1Q9BT17 334 aaPredicted RBP18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 RNF26Q9BY78 433 aaPredicted RBP18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 ZMYND12Q9H0C1 365 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 TPCN1Q9ULQ1 816 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 UBIAD1Q9Y5Z9 338 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 SZT2Q5T011 3432 aa18.51■□□□□ 0.55
SCAMP4-205ENST00000452128 SCN10AQ9Y5Y9 1956 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms