RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 CCDC12Q8WUD4 166 aaPredicted RBP18.03■□□□□ 0.48
TOP3B-211ENST00000449704 GLT8D2Q9H1C3 349 aa18.03■□□□□ 0.48
TOP3B-211ENST00000449704 UPF3AQ9H1J1 476 aaKnown RBP18.03■□□□□ 0.48
TOP3B-211ENST00000449704 MCM3APO60318 1980 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 ARIH2O95376 493 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 ATN1P54259 1190 aaPredicted RBP18.02■□□□□ 0.48
TOP3B-211ENST00000449704 RABEP1Q15276 862 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 OR6J1Q8NGC5 347 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 COPS5Q92905 334 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 BACH2Q9BYV9 841 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 C6orf50Q9HD87 102 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 RTEL1Q9NZ71 1219 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 VPS54Q9P1Q0 977 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 PCDHA6Q9UN73 950 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 LIMCH1Q9UPQ0 1083 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 Q9Y3F1 56 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 PCDHA8Q9Y5H6 950 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 MRVI1Q9Y6F6 885 aa18.02■□□□□ 0.48
TOP3B-211ENST00000449704 LCTP09848 1927 aa18.02■□□□□ 0.47
TOP3B-211ENST00000449704 MKI67P46013 3256 aaKnown RBP18.01■□□□□ 0.47
TOP3B-211ENST00000449704 NKRFO15226 690 aaKnown RBP eCLIP18.01■□□□□ 0.47
TOP3B-211ENST00000449704 DEXIO95424 95 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 ACLYP53396 1101 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 FSCN1Q16658 493 aaKnown RBP18.01■□□□□ 0.47
TOP3B-211ENST00000449704 LY6KQ17RY6 165 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 PCSK9Q8NBP7 692 aaKnown RBP18.01■□□□□ 0.47
TOP3B-211ENST00000449704 CCDC148Q8NFR7 591 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 PGBD1Q96JS3 809 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 TBC1D32Q96NH3 1257 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 TSEN34Q9BSV6 310 aaKnown RBP18.01■□□□□ 0.47
TOP3B-211ENST00000449704 EHMT1Q9H9B1 1298 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 TMEM260Q9NX78 707 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 PHF24Q9UPV7 400 aa18.01■□□□□ 0.47
TOP3B-211ENST00000449704 FRMPD4Q14CM0 1322 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 ESYT2A0FGR8 921 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 CTAGE5O15320 804 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 ZEB2O60315 1214 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 EVI5O60447 810 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 RGS20O76081 388 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 FOSP01100 380 aaPredicted RBP18■□□□□ 0.47
TOP3B-211ENST00000449704 CST5P28325 142 aaPredicted RBP18■□□□□ 0.47
TOP3B-211ENST00000449704 GNA11P29992 359 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 NLRP5P59047 1200 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 MRPS9P82933 396 aaKnown RBP18■□□□□ 0.47
TOP3B-211ENST00000449704 JAKMIP3Q5VZ66 844 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 PCNX4Q63HM2 1172 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 CCSAPQ6IQ19 270 aaPredicted RBP18■□□□□ 0.47
TOP3B-211ENST00000449704 XRRA1Q6P2D8 792 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 CCDC62Q6P9F0 684 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 TEX2Q8IWB9 1127 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 GTF3C6Q969F1 213 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 VTI1AQ96AJ9 217 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 AIFM3Q96NN9 605 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 ZMYND12Q9H0C1 365 aa18■□□□□ 0.47
TOP3B-211ENST00000449704 A0A1W2PQ45 241 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-211ENST00000449704 A0A1W2PQY0 241 aa17.99■□□□□ 0.47
TOP3B-211ENST00000449704 MOXD2PA6NHM9 499 aa17.99■□□□□ 0.47
TOP3B-211ENST00000449704 CTDNEP1O95476 244 aa17.99■□□□□ 0.47
TOP3B-211ENST00000449704 ASGR1P07306 291 aa17.99■□□□□ 0.47
TOP3B-211ENST00000449704 LRRC26Q2I0M4 334 aa17.99■□□□□ 0.47
TOP3B-211ENST00000449704 SH3GLB2Q9NR46 395 aa17.99■□□□□ 0.47
TOP3B-211ENST00000449704 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-211ENST00000449704 DDX41Q9UJV9 622 aaKnown RBP17.99■□□□□ 0.47
TOP3B-211ENST00000449704 ST18O60284 1047 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 SORBS3O60504 671 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 STAM2O75886 525 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 GH1P01241 217 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 NKX3-2P78367 333 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 AP3B2Q13367 1082 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 GNPTABQ3T906 1256 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 BRDTQ58F21 947 aaPredicted RBP17.98■□□□□ 0.47
TOP3B-211ENST00000449704 KCNV1Q6PIU1 500 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 SLC39A5Q6ZMH5 540 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 REXO1Q8N1G1 1221 aaKnown RBP17.98■□□□□ 0.47
TOP3B-211ENST00000449704 BICD2Q8TD16 824 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
TOP3B-211ENST00000449704 INPP4AQ96PE3 977 aaPredicted RBP17.98■□□□□ 0.47
TOP3B-211ENST00000449704 ANO3Q9BYT9 981 aa17.98■□□□□ 0.47
TOP3B-211ENST00000449704 ADAMTS3O15072 1205 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 CLK2P49760 499 aaKnown RBP17.97■□□□□ 0.47
TOP3B-211ENST00000449704 CPT1AP50416 773 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 CXCL17Q6UXB2 119 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 NLRX1Q86UT6 975 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 CCDC83Q8IWF9 413 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 DHX37Q8IY37 1157 aaKnown RBP17.97■□□□□ 0.47
TOP3B-211ENST00000449704 C7orf61Q8IZ16 206 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 GLT1D1Q96MS3 346 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 STARD7Q9NQZ5 370 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 NR2E3Q9Y5X4 410 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 STK36Q9NRP7 1315 aa17.97■□□□□ 0.47
TOP3B-211ENST00000449704 MYL3P08590 195 aa17.96■□□□□ 0.47
TOP3B-211ENST00000449704 TGFB3P10600 412 aa17.96■□□□□ 0.47
TOP3B-211ENST00000449704 RTP1P59025 263 aa17.96■□□□□ 0.47
TOP3B-211ENST00000449704 NSUN7Q8NE18 718 aaKnown RBP17.96■□□□□ 0.47
TOP3B-211ENST00000449704 RASGRP4Q8TDF6 673 aa17.96■□□□□ 0.47
TOP3B-211ENST00000449704 AFG1LQ8WV93 481 aa17.96■□□□□ 0.47
TOP3B-211ENST00000449704 WASF1Q92558 559 aa17.96■□□□□ 0.47
TOP3B-211ENST00000449704 SH2B1Q9NRF2 756 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-211ENST00000449704 ATP11BQ9Y2G3 1177 aa17.96■□□□□ 0.47
TOP3B-211ENST00000449704 SPATA31C2B4DYI2 1134 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms