RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CTNNB1P35222 781 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 RRP1P56182 461 aaKnown RBP14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 PDE4BQ07343 736 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 PTK7Q13308 1070 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 BAATQ14032 418 aaPredicted RBP14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 MBTPS1Q14703 1052 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 MCTP2Q6DN12 878 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 TRAF7Q6Q0C0 670 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 AACSQ86V21 672 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 STK11IPQ8N1F8 1099 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 CNTNAP3BQ96NU0 1288 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 C11orf84Q9BUA3 381 aaPredicted RBP14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 CNTNAP3Q9BZ76 1288 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 SLC4A4Q9Y6R1 1079 aa14.99□□□□□ -0.01
AC004540.1-204ENST00000449537 C5orf67F2Z3F1 127 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 PDGFBP01127 241 aaPredicted RBP14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 BMPR1AP36894 532 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 FIBCD1Q8N539 461 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 C7orf31Q8N865 590 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 RMDN1Q96DB5 314 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 PHF7Q9BWX1 381 aaPredicted RBP14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 INCENPQ9NQS7 918 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 HDAC6Q9UBN7 1215 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 GTF2IRD1Q9UHL9 959 aa14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 TPRP12270 2363 aaKnown RBP14.98□□□□□ -0.01
AC004540.1-204ENST00000449537 IGKV6D-41A0A0C4DH26 115 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 RBAK-RBAKDNI3L0D1 243 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 TTLL1O95922 423 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 CASTP20810 708 aaKnown RBP14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 SNAP25P60880 206 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 PDE4DQ08499 809 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 COASYQ13057 564 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 PTPN21Q16825 1174 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 TRIM71Q2Q1W2 868 aaKnown RBP14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 SLFNL1Q499Z3 407 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 SMRP1Q8NCR6 262 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 AFG1LQ8WV93 481 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 PPP2R3CQ969Q6 453 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 IL17RAQ96F46 866 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 CEP95Q96GE4 821 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 DNAJC2Q99543 621 aaKnown RBP14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 MPHOSPH6Q99547 160 aaKnown RBP14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 MTMR4Q9NYA4 1195 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 CLEC1BQ9P126 229 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 CCPG1Q9ULG6 757 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 RWDD3Q9Y3V2 267 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 MYO15AQ9UKN7 3530 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 NLRC5Q86WI3 1866 aa14.97□□□□□ -0.01
AC004540.1-204ENST00000449537 GREB1LQ9C091 1923 aaPredicted RBP14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 MYH4Q9Y623 1939 aa14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 RSPH10B2B2RC85 870 aa14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 RSPH10BP0C881 870 aa14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 ADD2P35612 726 aa14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 PLEKHG4Q58EX7 1191 aa14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 ZBTB33Q86T24 672 aa14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 KAT2BQ92831 832 aa14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 ARPP21Q9UBL0 812 aaPredicted RBP14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 USP15Q9Y4E8 981 aaPredicted RBP14.96□□□□□ -0.01
AC004540.1-204ENST00000449537 ZBED9Q6R2W3 1325 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 PTPDC1A2A3K4 754 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 PLA2G6O60733 806 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 CSPG5O95196 566 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 SLC1A4P43007 532 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 PUM1Q14671 1186 aaKnown RBP eCLIP14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 SEPT8Q92599 483 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 CHMP4CQ96CF2 233 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 ALG1Q9BT22 464 aa14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 IFIH1Q9BYX4 1025 aaKnown RBP14.95□□□□□ -0.02
AC004540.1-204ENST00000449537 MINDY4BA8MYZ0 360 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 IPO8O15397 1037 aaKnown RBP14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 MMP3P08254 477 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 MCCP23508 829 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 EFHBQ8N7U6 833 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 TMEM105Q8N8V8 129 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 WNT8BQ93098 351 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 GMCL1Q96IK5 515 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 ZNF287Q9HBT7 754 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 PRR12Q9ULL5 1215 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 KMT2BQ9UMN6 2715 aaPredicted RBP14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 RALGAPA2Q2PPJ7 1873 aa14.94□□□□□ -0.02
AC004540.1-204ENST00000449537 EP300Q09472 2414 aaPredicted RBP14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 B4DLN1 442 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 ARIH2O95376 493 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 MMP1P03956 469 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 ICAM1P05362 532 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 ATF7P17544 494 aaPredicted RBP14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 CALML3P27482 149 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 THPOP40225 353 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 PSEN2P49810 448 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 MRPL12P52815 198 aaKnown RBP14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 DGKDQ16760 1214 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 RCSD1Q6JBY9 416 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 KATNAL1Q9BW62 490 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 LCTP09848 1927 aa14.93□□□□□ -0.02
AC004540.1-204ENST00000449537 NCOR2Q9Y618 2525 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms