RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ARVCFO00192 962 aa16.83■□□□□ 0.28
USP39-206ENST00000448971 C6orf222P0C671 652 aaPredicted RBP16.83■□□□□ 0.28
USP39-206ENST00000448971 APOBRQ0VD83 1088 aa16.83■□□□□ 0.28
USP39-206ENST00000448971 MROH7Q68CQ1 1323 aa16.83■□□□□ 0.28
USP39-206ENST00000448971 CCDC82Q8N4S0 544 aa16.83■□□□□ 0.28
USP39-206ENST00000448971 SRBD1Q8N5C6 995 aaKnown RBP16.83■□□□□ 0.28
USP39-206ENST00000448971 CNTNAP5Q8WYK1 1306 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 CSF2RAP15509 400 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 SMARCA1P28370 1054 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 PBX2P40425 430 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 METAP2P50579 478 aaKnown RBP eCLIP16.82■□□□□ 0.28
USP39-206ENST00000448971 PDE4DQ08499 809 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 PPIGQ13427 754 aaKnown RBP eCLIP16.82■□□□□ 0.286e-7■■■□□ 16
USP39-206ENST00000448971 GNASQ5JWF2 1037 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 RUFY3Q7L099 469 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 DNERQ8NFT8 737 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 PBX4Q9BYU1 374 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
USP39-206ENST00000448971 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
USP39-206ENST00000448971 LOC102724159A0A0B4J2E5 919 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
USP39-206ENST00000448971 B4DLN1 442 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 CD4P01730 458 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 MRPL12P52815 198 aaKnown RBP16.81■□□□□ 0.28
USP39-206ENST00000448971 RCAN1P53805 252 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 PWP2Q15269 919 aaKnown RBP16.81■□□□□ 0.28
USP39-206ENST00000448971 TJAP1Q5JTD0 557 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 ZNF365Q70YC5 407 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
USP39-206ENST00000448971 PLCD3Q8N3E9 789 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 SYTL5Q8TDW5 730 aaPredicted RBP16.81■□□□□ 0.28
USP39-206ENST00000448971 TBC1D5Q92609 795 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 MAF1Q9H063 256 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 VTA1Q9NP79 307 aa16.81■□□□□ 0.28
USP39-206ENST00000448971 BDP1A6H8Y1 2624 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 hCG_1642624A0A1W2PR95 340 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 OPLAHO14841 1288 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 ACRP10323 421 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 TMEM199Q8N511 208 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 SLC43A3Q8NBI5 491 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 VTI1AQ96AJ9 217 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 ZSWIM6Q9HCJ5 1215 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 COL20A1Q9P218 1284 aa16.8■□□□□ 0.28
USP39-206ENST00000448971 REV3LO60673 3130 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 GCOM1H8Y6P7 765 aaPredicted RBP16.79■□□□□ 0.28
USP39-206ENST00000448971 POLR2MP0CAP2 368 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 EIF2AK2P19525 551 aaKnown RBP16.79■□□□□ 0.28
USP39-206ENST00000448971 HOXA13P31271 388 aaPredicted RBP16.79■□□□□ 0.28
USP39-206ENST00000448971 HSD17B4P51659 736 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 ARHGEF16Q5VV41 709 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 HEATR3Q7Z4Q2 680 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 MORC4Q8TE76 937 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
USP39-206ENST00000448971 TAAR1Q96RJ0 339 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 RMDN3Q96TC7 470 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 TM6SF1Q9BZW5 370 aa16.79■□□□□ 0.28
USP39-206ENST00000448971 GNEQ9Y223 722 aaKnown RBP16.79■□□□□ 0.28
USP39-206ENST00000448971 NID2Q14112 1375 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.78■□□□□ 0.28
USP39-206ENST00000448971 CDC27P30260 824 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 CYP2C18P33260 490 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 ANAPC15P60006 121 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 BEX3Q00994 111 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 TNFAIP2Q03169 654 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 TLK2Q86UE8 772 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 HERVK_113Q902F9 699 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 CUL5Q93034 780 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 AGXT2Q9BYV1 514 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 PRDM12Q9H4Q4 367 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
USP39-206ENST00000448971 MAP3K20Q9NYL2 800 aaKnown RBP16.78■□□□□ 0.28
USP39-206ENST00000448971 CXXC1Q9P0U4 656 aaPredicted RBP16.78■□□□□ 0.28
USP39-206ENST00000448971 GRIN2DO15399 1336 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 EDNRBP24530 442 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 GHRHRQ02643 423 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 ADGRE1Q14246 886 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 PSRC1Q6PGN9 363 aaPredicted RBP16.77■□□□□ 0.28
USP39-206ENST00000448971 FCHSD1Q86WN1 690 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 FBXL16Q8N461 479 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 SAMD3Q8N6K7 520 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 SMARCC2Q8TAQ2 1214 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 GPKOWQ92917 476 aaPredicted RBP eCLIP16.77■□□□□ 0.28
USP39-206ENST00000448971 GAS2L1Q99501 681 aaPredicted RBP16.77■□□□□ 0.28
USP39-206ENST00000448971 IL23AQ9NPF7 189 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 PXMP2Q9NR77 195 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 PDGFCQ9NRA1 345 aa16.77■□□□□ 0.28
USP39-206ENST00000448971 TNFRSF10AO00220 468 aa16.76■□□□□ 0.27
USP39-206ENST00000448971 TLR3O15455 904 aaKnown RBP16.76■□□□□ 0.27
USP39-206ENST00000448971 TOB2Q14106 344 aaPredicted RBP16.76■□□□□ 0.27
USP39-206ENST00000448971 C8orf34Q49A92 452 aa16.76■□□□□ 0.27
USP39-206ENST00000448971 TAPT1Q6NXT6 567 aa16.76■□□□□ 0.27
USP39-206ENST00000448971 CXCL17Q6UXB2 119 aa16.76■□□□□ 0.27
USP39-206ENST00000448971 ATXN2LQ8WWM7 1075 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms