RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 NCOA5Q9HCD5 579 aaKnown RBP28.75■■■□□ 2.19
UFD1-204ENST00000447868 PPFIA3O75145 1194 aa28.74■■■□□ 2.19
UFD1-204ENST00000447868 COLQQ9Y215 455 aaPredicted RBP28.74■■■□□ 2.19
UFD1-204ENST00000447868 MRVI1Q9Y6F6 885 aa28.74■■■□□ 2.19
UFD1-204ENST00000447868 ELP1O95163 1332 aa28.73■■■□□ 2.19
UFD1-204ENST00000447868 FRMPD4Q14CM0 1322 aa28.73■■■□□ 2.19
UFD1-204ENST00000447868 PQBP1O60828 265 aaKnown RBP28.73■■■□□ 2.19
UFD1-204ENST00000447868 CPT1AP50416 773 aa28.73■■■□□ 2.19
UFD1-204ENST00000447868 TLE2Q04725 743 aa28.73■■■□□ 2.19
UFD1-204ENST00000447868 TYW1BQ6NUM6 668 aa28.73■■■□□ 2.19
UFD1-204ENST00000447868 PHKBQ93100 1093 aa28.73■■■□□ 2.19
UFD1-204ENST00000447868 STXBP3O00186 592 aa28.72■■■□□ 2.19
UFD1-204ENST00000447868 RGS20O76081 388 aa28.72■■■□□ 2.19
UFD1-204ENST00000447868 STK3Q13188 491 aa28.72■■■□□ 2.19
UFD1-204ENST00000447868 C8orf34Q49A92 452 aa28.72■■■□□ 2.19
UFD1-204ENST00000447868 PRDM5Q9NQX1 630 aaPredicted RBP28.72■■■□□ 2.19
UFD1-204ENST00000447868 PRKAG2Q9UGJ0 569 aa28.72■■■□□ 2.19
UFD1-204ENST00000447868 DDX41Q9UJV9 622 aaKnown RBP28.72■■■□□ 2.19
UFD1-204ENST00000447868 A0A0U1RQG5 324 aaPredicted RBP28.71■■■□□ 2.19
UFD1-204ENST00000447868 hCG_1984214I3L0E3 225 aa28.71■■■□□ 2.19
UFD1-204ENST00000447868 GH1P01241 217 aa28.71■■■□□ 2.19
UFD1-204ENST00000447868 MYL3P08590 195 aa28.71■■■□□ 2.19
UFD1-204ENST00000447868 PFKFB3Q16875 520 aaPredicted RBP28.71■■■□□ 2.19
UFD1-204ENST00000447868 PPP1R18Q6NYC8 613 aa28.71■■■□□ 2.19
UFD1-204ENST00000447868 ZNF713Q8N859 430 aaPredicted RBP28.71■■■□□ 2.19
UFD1-204ENST00000447868 ZNF274Q96GC6 653 aaPredicted RBP28.71■■■□□ 2.19
UFD1-204ENST00000447868 BARHL2Q9NY43 387 aa28.71■■■□□ 2.19
UFD1-204ENST00000447868 PRPF3O43395 683 aaKnown RBP28.7■■■□□ 2.18
UFD1-204ENST00000447868 CABYRO75952 493 aa28.7■■■□□ 2.18
UFD1-204ENST00000447868 SCG2P13521 617 aa28.7■■■□□ 2.18
UFD1-204ENST00000447868 MRPS9P82933 396 aaKnown RBP28.7■■■□□ 2.18
UFD1-204ENST00000447868 AKAP17AQ02040 695 aaKnown RBP28.7■■■□□ 2.18
UFD1-204ENST00000447868 NTRK3Q16288 839 aa28.7■■■□□ 2.18
UFD1-204ENST00000447868 BRDTQ58F21 947 aaPredicted RBP28.7■■■□□ 2.18
UFD1-204ENST00000447868 SLC26A6Q9BXS9 759 aa28.7■■■□□ 2.18
UFD1-204ENST00000447868 RTEL1Q9NZ71 1219 aa28.7■■■□□ 2.18
UFD1-204ENST00000447868 SMCO2A6NFE2 343 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 SPDYE3A6NKU9 549 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 ADCY7P51828 1080 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 PSMC6P62333 389 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 ARHGAP1Q07960 439 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 RIC8AQ9NPQ8 531 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 PDLIM7Q9NR12 457 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 POLR3EQ9NVU0 708 aa28.69■■■□□ 2.18
UFD1-204ENST00000447868 A6NJR5 290 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 ARVCFO00192 962 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 SORBS3O60504 671 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 MAGEA10P43363 369 aaPredicted RBP28.68■■■□□ 2.18
UFD1-204ENST00000447868 PKN1Q16512 942 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 SH3RF1Q7Z6J0 888 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 AFG1LQ8WV93 481 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 RBM27Q9P2N5 1060 aaKnown RBP28.68■■■□□ 2.18
UFD1-204ENST00000447868 PCDHA6Q9UN73 950 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 PCDHA8Q9Y5H6 950 aa28.68■■■□□ 2.18
UFD1-204ENST00000447868 MYH7BA7E2Y1 1941 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 DCDC2CA8MYV0 355 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 CLTBP09497 229 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 IFNAR1P17181 557 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 PURAQ00577 322 aaKnown RBP28.67■■■□□ 2.18
UFD1-204ENST00000447868 MDM2Q00987 491 aaPredicted RBP28.67■■■□□ 2.18
UFD1-204ENST00000447868 PCNX4Q63HM2 1172 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 KCNV1Q6PIU1 500 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 ANKRD33Q7Z3H0 272 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 IL17RAQ96F46 866 aa28.67■■■□□ 2.18
UFD1-204ENST00000447868 RNF26Q9BY78 433 aaPredicted RBP28.67■■■□□ 2.18
UFD1-204ENST00000447868 CPLX1O14810 134 aa28.66■■■□□ 2.18
UFD1-204ENST00000447868 STAM2O75886 525 aa28.66■■■□□ 2.18
UFD1-204ENST00000447868 CDK7P50613 346 aa28.66■■■□□ 2.18
UFD1-204ENST00000447868 ITGA7Q13683 1181 aa28.66■■■□□ 2.18
UFD1-204ENST00000447868 GNPTABQ3T906 1256 aa28.66■■■□□ 2.18
UFD1-204ENST00000447868 DHX37Q8IY37 1157 aaKnown RBP28.66■■■□□ 2.18
UFD1-204ENST00000447868 ALDH8A1Q9H2A2 487 aaPredicted RBP28.66■■■□□ 2.18
UFD1-204ENST00000447868 MROH7Q68CQ1 1323 aa28.66■■■□□ 2.18
UFD1-204ENST00000447868 AK2P54819 239 aa28.65■■■□□ 2.18
UFD1-204ENST00000447868 SP2Q02086 613 aa28.65■■■□□ 2.18
UFD1-204ENST00000447868 PGBD1Q96JS3 809 aa28.65■■■□□ 2.18
UFD1-204ENST00000447868 TOX2Q96NM4 488 aa28.65■■■□□ 2.18
UFD1-204ENST00000447868 GDF15Q99988 308 aa28.65■■■□□ 2.18
UFD1-204ENST00000447868 LBHD1Q9BQE6 289 aaPredicted RBP28.65■■■□□ 2.18
UFD1-204ENST00000447868 MTG1Q9BT17 334 aaPredicted RBP28.65■■■□□ 2.18
UFD1-204ENST00000447868 TPCN1Q9ULQ1 816 aa28.65■■■□□ 2.18
UFD1-204ENST00000447868 GRIN2DO15399 1336 aa28.65■■■□□ 2.18
UFD1-204ENST00000447868 TRIM43BA6NCK2 446 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 MMP3P08254 477 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 UBA1P22314 1058 aaKnown RBP28.64■■■□□ 2.18
UFD1-204ENST00000447868 FAAP100Q0VG06 881 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 LAMC2Q13753 1193 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 XRRA1Q6P2D8 792 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 TRIM43Q96BQ3 446 aaPredicted RBP28.64■■■□□ 2.18
UFD1-204ENST00000447868 INPP4AQ96PE3 977 aaPredicted RBP28.64■■■□□ 2.18
UFD1-204ENST00000447868 PRO3102Q9H379 93 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 EHMT1Q9H9B1 1298 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 TMEM39AQ9NV64 488 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 TMEM260Q9NX78 707 aa28.64■■■□□ 2.18
UFD1-204ENST00000447868 KPNA6O60684 536 aa28.63■■■□□ 2.17
UFD1-204ENST00000447868 GGPS1O95749 300 aa28.63■■■□□ 2.17
UFD1-204ENST00000447868 TGFB3P10600 412 aa28.63■■■□□ 2.17
UFD1-204ENST00000447868 NEK4P51957 841 aa28.63■■■□□ 2.17
UFD1-204ENST00000447868 SSRP1Q08945 709 aaKnown RBP28.63■■■□□ 2.17
UFD1-204ENST00000447868 ANKRD1Q15327 319 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms