RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 HMOX2P30519 316 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 ADKP55263 362 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 PTGISQ16647 500 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SYCE1Q8N0S2 351 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 CHMP2BQ9UQN3 213 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 GOLGA4Q13439 2230 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 CMA1P23946 247 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 GJB2P29033 226 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 RFC1P35251 1148 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 TDRD12Q587J7 1177 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 CREB3L3Q68CJ9 461 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 HAUS3Q68CZ6 603 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PATL1Q86TB9 770 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 NSUN7Q8NE18 718 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 KCNB2Q92953 911 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 KAT14Q9H8E8 782 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SLAIN2Q9P270 581 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 FBXO9Q9UK97 447 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 MYH9P35579 1960 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 TRAPPC8Q9Y2L5 1435 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 A0A1B0GW55 424 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PSMD14O00487 310 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 DUX4L2P0CJ85 424 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 DUX4L3P0CJ86 424 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 DUX4L4P0CJ87 422 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 DUX4L5P0CJ88 424 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 DUX4L6P0CJ89 424 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 DUX4L7P0CJ90 424 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 ZNF24P17028 368 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 RAP1GDS1P52306 607 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 AP1B1Q10567 949 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 STRN3Q13033 797 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 THEMIS2Q5TEJ8 643 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 FOXD4L5Q5VV16 416 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 PPP4R4Q6NUP7 873 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PI16Q6UXB8 463 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SPICE1Q8N0Z3 855 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 ZGPATQ8N5A5 531 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 ZNF398Q8TD17 642 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 FOXD4L4Q8WXT5 416 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 NUP88Q99567 741 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 UBAC1Q9BSL1 405 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 STMN3Q9NZ72 180 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 DUX4Q9UBX2 424 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 AKR1B10O60218 316 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 FKBP6O75344 327 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SERPINB10P48595 397 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 TRIML2Q8N7C3 387 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 SNX27Q96L92 541 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 NDEL1Q9GZM8 345 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 INTS9Q9NV88 658 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 PLK2Q9NYY3 685 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 WDR35Q9P2L0 1181 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SPDYE3A6NKU9 549 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 NVLO15381 856 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 TOM1L1O75674 476 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PORP16435 677 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 RPL13P26373 211 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 ADARP55265 1226 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 PPP2R5BQ15173 497 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 NEUROD6Q96NK8 337 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 MMRN2Q9H8L6 949 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SYBUQ9NX95 663 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 EURLQ9NYK6 297 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 HPCAL4Q9UM19 191 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 ZDHHC9Q9Y397 364 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PIK3R4Q99570 1358 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 KIAA1210Q9ULL0 1709 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 KPNA4O00629 521 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 SERPINI2O75830 405 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PRPF6O94906 941 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 NEUROD2Q15784 382 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 TMEM154Q6P9G4 183 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 B3GNT6Q6ZMB0 384 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 CYP2U1Q7Z449 544 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SEPT8Q92599 483 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 LENG1Q96BZ8 264 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 NOX5Q96PH1 765 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 METTL22Q9BUU2 404 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 MRPL40Q9NQ50 206 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 DNAJC17Q9NVM6 304 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 DDX20Q9UHI6 824 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 NOB1Q9ULX3 412 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 EVPLLA8MZ36 301 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 RGS16O15492 202 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 PDE1AP54750 535 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TBCCQ15814 346 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TRIM22Q8IYM9 498 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ANKRD35Q8N283 1001 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 ERLEC1Q96DZ1 483 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PBKQ96KB5 322 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PUF60Q9UHX1 559 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 ITM2BQ9Y287 266 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 GRIN2BQ13224 1484 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 ATP9BO43861 1147 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 OPHN1O60890 802 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SNAPC5O75971 98 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms