RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SOD2P04179 222 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 CYBBP04839 570 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 KCNA6P17658 529 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 NAT1P18440 290 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 SDSP20132 328 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 SDHBP21912 280 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 GRK2P25098 689 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 GRK3P35626 688 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 SLC6A11P48066 632 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 GUCY1A3Q02108 690 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 DALRD3Q5D0E6 543 aaKnown RBP6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 MROH9Q5TGP6 573 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 NINJ1Q92982 152 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 IPPKQ9H8X2 491 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 BTG4Q9NY30 223 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 CLDND1Q9NY35 253 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 KLHL14Q9P2G3 628 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 PLAAQ9Y263 795 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 PCDHA8Q9Y5H6 950 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 NTRK1P04629 796 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 CKMP06732 381 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 PAK1Q13153 545 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 EMC4Q5J8M3 183 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 ADGRF1Q5T601 910 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 BICRALQ6AI39 1079 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 PAQR3Q6TCH7 311 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 RPTNQ6XPR3 784 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 TRMT2BQ96GJ1 504 aaKnown RBP6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 MAGEB10Q96LZ2 347 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 ALG1Q9BT22 464 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 ZNF552Q9H707 407 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 INTS7Q9NVH2 962 aaKnown RBP6.33□□□□□ -1.4
HMGB1P48-201ENST00000446155 OR14I1A6ND48 311 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 MPOP05164 745 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 NR1I3Q14994 352 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 TM4SF20Q53R12 229 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 ABHD17CQ6PCB6 329 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 MTDHQ86UE4 582 aaKnown RBP6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 CABP7Q86V35 215 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 JAM3Q9BX67 310 aa6.32□□□□□ -1.4
HMGB1P48-201ENST00000446155 FAM47E-STBD1D6RA91 191 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 MAPKAPK2P49137 400 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 GYS2P54840 703 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 PLEKHN1Q494U1 663 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 USP33Q8TEY7 942 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 TSPAN17Q96FV3 270 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 MAGEC2Q9UBF1 373 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB1P48-201ENST00000446155 MYOCOSA0A1B0GUC4 107 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 A0A1W2PQJ5 194 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 ZC3H12DA2A288 527 aaKnown RBP6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 NUDT19A8MXV4 375 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 SGSM2O43147 1006 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 TADA3O75528 432 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 ASLP04424 464 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 FBLN1P23142 703 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 PDE6BP35913 854 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 ZNF460Q14592 562 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 RAB3GAP1Q15042 981 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 DCP2Q8IU60 420 aaKnown RBP6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 NIM1KQ8IY84 436 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 SEC14L1Q92503 715 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 MFSD3Q96ES6 412 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 CELF4Q9BZC1 486 aaKnown RBP6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 COA3Q9Y2R0 106 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 SIT1Q9Y3P8 196 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 TNPO3Q9Y5L0 923 aaKnown RBP6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 HCFC2Q9Y5Z7 792 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 SBNO2Q9Y2G9 1366 aa6.3□□□□□ -1.4
HMGB1P48-201ENST00000446155 A0A087X0B3 334 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 TCRBV5S4A2TA0A5A2 114 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 ABLIM1O14639 778 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 PEX10O60683 326 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 POU3F2P20265 443 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 IGFALSP35858 605 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 MPZL3Q6UWV2 235 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 C16orf59Q7L2K0 433 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 DHX37Q8IY37 1157 aaKnown RBP6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 FBXW5Q969U6 566 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 PEX11GQ96HA9 241 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 NSUN3Q9H649 340 aaKnown RBP6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 SLC6A20Q9NP91 592 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 CBLCQ9ULV8 474 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
HMGB1P48-201ENST00000446155 GSG1L2A8MUP6 293 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 F8W031 263 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 IRS4O14654 1257 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 NKRFO15226 690 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 DGKIO75912 1065 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 NPTXRO95502 500 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 VIPR1P32241 457 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 LACTBP83111 547 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms