RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 CLK2P49760 499 aaKnown RBP18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 DGKZQ13574 1117 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 KCNB1Q14721 858 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 NBPF9Q3BBW0 867 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 POTEGQ6S5H5 508 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 POTEEQ6S8J3 1075 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 NELFCDQ8IXH7 590 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 DCAF4Q8WV16 495 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 FBXO28Q9NVF7 368 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 SPDYE3A6NKU9 549 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 SPAG1Q07617 926 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 ERCC6LQ2NKX8 1250 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 CHP1Q99653 195 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 SLF1Q9BQI6 1058 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 TUBGCP2Q9BSJ2 902 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 FXR2P51116 673 aaKnown RBP eCLIP18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 HDLBPQ00341 1268 aaKnown RBP18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 RAD54LQ92698 747 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 FGFBP2Q9BYJ0 223 aa18.77■□□□□ 0.6
LAPTM4B-201ENST00000445593 CHMP2AO43633 222 aa18.77■□□□□ 0.59
LAPTM4B-201ENST00000445593 ZNF76P36508 570 aa18.77■□□□□ 0.59
LAPTM4B-201ENST00000445593 ARHGAP4P98171 946 aa18.77■□□□□ 0.59
LAPTM4B-201ENST00000445593 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.59
LAPTM4B-201ENST00000445593 C7orf25Q9BPX7 421 aa18.77■□□□□ 0.59
LAPTM4B-201ENST00000445593 PRR12Q9ULL5 1215 aa18.77■□□□□ 0.59
LAPTM4B-201ENST00000445593 TTC26A0AVF1 554 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 SLU7O95391 586 aaKnown RBP18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 KRT18P05783 430 aaKnown RBP18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 ERVK-24P63145 666 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 CT47A1Q5JQC4 288 aaPredicted RBP18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 EPC1Q9H2F5 836 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 SEMA6BQ9H3T3 888 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 MYH7BA7E2Y1 1941 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 CCDC175P0C221 793 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 TRMT1LQ7Z2T5 733 aaKnown RBP18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 MKL1Q969V6 931 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 ABHD10Q9NUJ1 306 aa18.76■□□□□ 0.59
LAPTM4B-201ENST00000445593 TRIM21P19474 475 aaKnown RBP18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 CCNE1P24864 410 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 PPP1R18Q6NYC8 613 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 CNNM4Q6P4Q7 775 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 CNGA4Q8IV77 575 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 MTMR8Q96EF0 704 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 NOC4LQ9BVI4 516 aaKnown RBP18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 HDAC9Q9UKV0 1011 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 FAM86B1E9PN63 330 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 KIF2AO00139 706 aaPredicted RBP18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 EGFRP00533 1210 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 TFRCP02786 760 aaKnown RBP18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 FAM86B2P0C5J1 330 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 DMTNQ08495 405 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 TBC1D8BQ0IIM8 1120 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 SYCP1Q15431 976 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 CARD6Q9BX69 1037 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 CUEDC2Q9H467 287 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 PKD2L1Q9P0L9 805 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 CCP110O43303 1012 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 ENTPD3O75355 529 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 CASQ1P31415 396 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 PPP4R3AQ6IN85 833 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 MB21D1Q8N884 522 aa18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.75■□□□□ 0.59
LAPTM4B-201ENST00000445593 TULP1O00294 542 aaPredicted RBP18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 PABPC4Q13310 644 aaKnown RBP eCLIP18.74■□□□□ 0.594e-7■■□□□ 12.9
LAPTM4B-201ENST00000445593 NIM1KQ8IY84 436 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 PANX2Q96RD6 677 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 AGPAT5Q9NUQ2 364 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 ADGRG1Q9Y653 693 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 SIPA1L1O43166 1804 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 MED24O75448 989 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 PSMC6P62333 389 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 GPBP1Q86WP2 473 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 CCDC155Q8N6L0 562 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 MRIQ9BWK5 157 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 TANGO6Q9C0B7 1094 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 BCAS3Q9H6U6 928 aa18.74■□□□□ 0.59
LAPTM4B-201ENST00000445593 ZSCAN20P17040 1043 aaPredicted RBP18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 KCNA3P22001 575 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 KCNJ6P48051 423 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 STAT2P52630 851 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 MNS1Q8NEH6 495 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 FEZ1Q99689 392 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 TRIM10Q9UDY6 481 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 ZBTB21Q9ULJ3 1066 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 QSER1Q2KHR3 1735 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 LGALS16A8MUM7 142 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 FKBP1AP62942 108 aaKnown RBP18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 DHTKD1Q96HY7 919 aaPredicted RBP18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 KCND1Q9NSA2 647 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 FAM207AQ9NSI2 230 aaPredicted RBP18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 COL4A5P29400 1685 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 CXCL9Q07325 125 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 ARHGAP29Q52LW3 1261 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 UNC13DQ70J99 1090 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 STK17AQ9UEE5 414 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 FZD1Q9UP38 647 aa18.73■□□□□ 0.59
LAPTM4B-201ENST00000445593 LRRC10BA6NIK2 292 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 MYL1P05976 194 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 BAG6P46379 1132 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms