RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 RTL5Q5HYW3 569 aaPredicted RBP8.01□□□□□ -1.13
BRAFP1-201ENST00000445336 CLEC18BQ6UXF7 455 aa8.01□□□□□ -1.13
BRAFP1-201ENST00000445336 TLK2Q86UE8 772 aa8.01□□□□□ -1.13
BRAFP1-201ENST00000445336 CCDC84Q86UT8 332 aaPredicted RBP8.01□□□□□ -1.13
BRAFP1-201ENST00000445336 CLEC18CQ8NCF0 446 aa8.01□□□□□ -1.13
BRAFP1-201ENST00000445336 ZHX1Q9UKY1 873 aaPredicted RBP8.01□□□□□ -1.13
BRAFP1-201ENST00000445336 SHROOM3Q8TF72 1996 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
BRAFP1-201ENST00000445336 NEXNQ0ZGT2 675 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 PTK7Q13308 1070 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 IFIT5Q13325 482 aaKnown RBP8□□□□□ -1.13
BRAFP1-201ENST00000445336 RAB44Q7Z6P3 723 aaPredicted RBP8□□□□□ -1.13
BRAFP1-201ENST00000445336 DDX41Q9UJV9 622 aaKnown RBP8□□□□□ -1.13
BRAFP1-201ENST00000445336 COL5A1P20908 1838 aaPredicted RBP8□□□□□ -1.13
BRAFP1-201ENST00000445336 PAPLNO95428 1278 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 GTF2F1P35269 517 aaKnown RBP eCLIP8□□□□□ -1.13
BRAFP1-201ENST00000445336 PLEKHG4Q58EX7 1191 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 BRDTQ58F21 947 aaPredicted RBP8□□□□□ -1.13
BRAFP1-201ENST00000445336 ZNF689Q96CS4 500 aaPredicted RBP8□□□□□ -1.13
BRAFP1-201ENST00000445336 ARHGEF3Q9NR81 526 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 VPS45Q9NRW7 570 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 TRMT13Q9NUP7 481 aaKnown RBP8□□□□□ -1.13
BRAFP1-201ENST00000445336 EPS15L1Q9UBC2 864 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 NDUFB9Q9Y6M9 179 aa8□□□□□ -1.13
BRAFP1-201ENST00000445336 NBNO60934 754 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 CASP7P55210 303 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 VPS37DQ86XT2 251 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 LENG1Q96BZ8 264 aaPredicted RBP7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 POMKQ9H5K3 350 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 RAD50Q92878 1312 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 POTEMA6NI47 508 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 MMP3P08254 477 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 PURAQ00577 322 aaKnown RBP7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 CCDC6Q16204 474 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 POTEGQ6S5H5 508 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 NCAPG2Q86XI2 1143 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 AFG1LQ8WV93 481 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 SEPT8Q92599 483 aa7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 CCDC85AQ96PX6 553 aaPredicted RBP7.99□□□□□ -1.13
BRAFP1-201ENST00000445336 ASB14A6NK59 587 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 TAF5LO75529 589 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 LDHBP07195 334 aaKnown RBP7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 GYG1P46976 350 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 XKR5Q6UX68 686 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 ATF7IPQ6VMQ6 1270 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 ADGRD2Q7Z7M1 963 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 MYADMQ96S97 322 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 MYO10Q9HD67 2058 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 GPR75-ASB3A0A0A6YYF3 556 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 ATP2A1O14983 1001 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 TRAF7Q6Q0C0 670 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 LRIG1Q96JA1 1093 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 SLC32A1Q9H598 525 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 MYH16Q9H6N6 1097 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 RPAP3Q9H6T3 665 aaPredicted RBP7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 IL17BQ9UHF5 180 aa7.98□□□□□ -1.13
BRAFP1-201ENST00000445336 KANSL1LA0AUZ9 987 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 DCLRE1AQ6PJP8 1040 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 VN1R2Q8NFZ6 395 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 LIMD1Q9UGP4 676 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 FBXO40Q9UH90 709 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 NID2Q14112 1375 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 TECP42680 631 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 RHDQ02161 417 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 SCAPQ12770 1279 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 SPTY2D1Q68D10 685 aaPredicted RBP7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 TICAM1Q8IUC6 712 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 MORC4Q8TE76 937 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 SMOC2Q9H3U7 446 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 VTA1Q9NP79 307 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 DMXL1Q9Y485 3027 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 PLXNA4Q9HCM2 1894 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 FBN3Q75N90 2809 aa7.97□□□□□ -1.13
BRAFP1-201ENST00000445336 CARNS1A5YM72 827 aa7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 ADCY6O43306 1168 aa7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 KCNA4P22459 653 aa7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 TRIM71Q2Q1W2 868 aaKnown RBP7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 ATAT1Q5SQI0 421 aa7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 ZNF594Q96JF6 807 aaPredicted RBP7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 NGRNQ9NPE2 291 aaKnown RBP7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 DDX4Q9NQI0 724 aaKnown RBP7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 NXF1Q9UBU9 619 aaKnown RBP7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 ZFP37Q9Y6Q3 630 aaPredicted RBP7.96□□□□□ -1.13
BRAFP1-201ENST00000445336 RBM47A0AV96 593 aaKnown RBP7.96□□□□□ -1.14
BRAFP1-201ENST00000445336 GDF9O60383 454 aa7.96□□□□□ -1.14
BRAFP1-201ENST00000445336 CHAF1AQ13111 956 aaPredicted RBP7.96□□□□□ -1.14
BRAFP1-201ENST00000445336 RNF43Q68DV7 783 aa7.96□□□□□ -1.14
BRAFP1-201ENST00000445336 ZNF746Q6NUN9 644 aaPredicted RBP7.96□□□□□ -1.14
BRAFP1-201ENST00000445336 CHL1O00533 1208 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 PRB1P04280 392 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 CKBP12277 381 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 PKDCCQ504Y2 493 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 ZMYM6O95789 1325 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 ITGB1P05556 798 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 POU3F2P20265 443 aaPredicted RBP7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 CCR3P51677 355 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 KSR2Q6VAB6 950 aa7.95□□□□□ -1.14
BRAFP1-201ENST00000445336 CCNI2Q6ZMN8 369 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms