RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 RGS20O76081 388 aa16.26■□□□□ 0.19
COMMD3-202ENST00000444869 ARHGAP1Q07960 439 aa16.26■□□□□ 0.19
COMMD3-202ENST00000444869 PGM5Q15124 567 aa16.26■□□□□ 0.19
COMMD3-202ENST00000444869 TMTC3Q6ZXV5 915 aa16.26■□□□□ 0.19
COMMD3-202ENST00000444869 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
COMMD3-202ENST00000444869 FANCBQ8NB91 859 aa16.26■□□□□ 0.19
COMMD3-202ENST00000444869 IL31RAQ8NI17 732 aa16.26■□□□□ 0.19
COMMD3-202ENST00000444869 TLR3O15455 904 aaKnown RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 EPB41L2O43491 1005 aaKnown RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 KPNA6O60684 536 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 TIMP1P01033 207 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 GH1P01241 217 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 HMGB1P09429 215 aaKnown RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 PSMC6P62333 389 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 C9orf50Q5SZB4 431 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 SEPT14Q6ZU15 432 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 MICU3Q86XE3 530 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 EMID1Q96A84 441 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 TCEANC2Q96MN5 208 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 MTG1Q9BT17 334 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 PPP4R2Q9NY27 417 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 DDX41Q9UJV9 622 aaKnown RBP16.25■□□□□ 0.19
COMMD3-202ENST00000444869 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
COMMD3-202ENST00000444869 CNTNAP5Q8WYK1 1306 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 REC8O95072 547 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 RCAN1P53805 252 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 EPHB4P54760 987 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 FPGSQ05932 587 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
COMMD3-202ENST00000444869 SHHQ15465 462 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 LY6KQ17RY6 165 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 CMTR1Q8N1G2 835 aaKnown RBP16.24■□□□□ 0.19
COMMD3-202ENST00000444869 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 TANC1Q9C0D5 1861 aa16.24■□□□□ 0.19
COMMD3-202ENST00000444869 MEIS2O14770 477 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 B4GALT4O60513 344 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 MMP3P08254 477 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 MYL3P08590 195 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 CCND2P30279 289 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 FUT2Q10981 343 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 MFSD5Q6N075 450 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 AFG1LQ8WV93 481 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 ALDH8A1Q9H2A2 487 aaPredicted RBP16.23■□□□□ 0.19
COMMD3-202ENST00000444869 RBM28Q9NW13 759 aaKnown RBP16.23■□□□□ 0.19
COMMD3-202ENST00000444869 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 NID2Q14112 1375 aa16.23■□□□□ 0.19
COMMD3-202ENST00000444869 DOCK5Q9H7D0 1870 aa16.22■□□□□ 0.19
COMMD3-202ENST00000444869 ZBTB43O43298 467 aa16.22■□□□□ 0.19
COMMD3-202ENST00000444869 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-202ENST00000444869 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-202ENST00000444869 KCNV1Q6PIU1 500 aa16.22■□□□□ 0.19
COMMD3-202ENST00000444869 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
COMMD3-202ENST00000444869 INPP4AQ96PE3 977 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-202ENST00000444869 AGXT2Q9BYV1 514 aa16.22■□□□□ 0.19
COMMD3-202ENST00000444869 TRPV6Q9H1D0 765 aa16.22■□□□□ 0.19
COMMD3-202ENST00000444869 LAMA2P24043 3122 aaKnown RBP16.22■□□□□ 0.19
COMMD3-202ENST00000444869 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 STAM2O75886 525 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 TGFB3P10600 412 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
COMMD3-202ENST00000444869 PTPN11Q06124 597 aaPredicted RBP16.21■□□□□ 0.19
COMMD3-202ENST00000444869 RTN1Q16799 776 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 USP17L6PQ6QN14 398 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 PPTC7Q8NI37 304 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
COMMD3-202ENST00000444869 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
COMMD3-202ENST00000444869 PPP1R12CQ9BZL4 782 aa16.21■□□□□ 0.19
COMMD3-202ENST00000444869 FAM217BQ9NTX9 383 aaPredicted RBP16.21■□□□□ 0.19
COMMD3-202ENST00000444869 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 CPA1P15085 419 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 UBA1P22314 1058 aaKnown RBP16.2■□□□□ 0.18
COMMD3-202ENST00000444869 ICAM3P32942 547 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 PPIGQ13427 754 aaKnown RBP eCLIP16.2■□□□□ 0.18
COMMD3-202ENST00000444869 LAMC2Q13753 1193 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 XRRA1Q6P2D8 792 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 BLOC1S2Q6QNY1 142 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 CCDC82Q8N4S0 544 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 KAT2BQ92831 832 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 CUL5Q93034 780 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 HIPK3Q9H422 1215 aa16.2■□□□□ 0.18
COMMD3-202ENST00000444869 UMODL1Q5DID0 1318 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 GOLGA8BA8MQT2 603 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 F2P00734 622 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 SUPT20HL2P0C7V6 817 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 CSF2RAP15509 400 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 CDC27P30260 824 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 CYP2C18P33260 490 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms