RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PRR16Q569H4 304 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 CCDC174Q6PII3 467 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 PRPF38AQ8NAV1 312 aaKnown RBP17.54■□□□□ 0.4
SNX13-204ENST00000444712 PRIMPOLQ96LW4 560 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 LRRC10BA6NIK2 292 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 EGFRP00533 1210 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 FDX1P10109 184 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 EEF1GP26641 437 aaKnown RBP17.54■□□□□ 0.4
SNX13-204ENST00000444712 APTXQ7Z2E3 356 aaKnown RBP17.54■□□□□ 0.4
SNX13-204ENST00000444712 FAM114A1Q8IWE2 563 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 SAMD3Q8N6K7 520 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 AS3MTQ9HBK9 375 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 R3HCC1Q9Y3T6 440 aaKnown RBP17.54■□□□□ 0.4
SNX13-204ENST00000444712 PPP2R3BQ9Y5P8 575 aa17.54■□□□□ 0.4
SNX13-204ENST00000444712 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
SNX13-204ENST00000444712 CFBP00751 764 aa17.53■□□□□ 0.4
SNX13-204ENST00000444712 ICAM1P05362 532 aa17.53■□□□□ 0.4
SNX13-204ENST00000444712 CCNE1P24864 410 aa17.53■□□□□ 0.4
SNX13-204ENST00000444712 TCP11X2Q5H9J9 407 aa17.53■□□□□ 0.4
SNX13-204ENST00000444712 TRIM47Q96LD4 638 aa17.53■□□□□ 0.4
SNX13-204ENST00000444712 MAGEC2Q9UBF1 373 aaPredicted RBP17.53■□□□□ 0.4
SNX13-204ENST00000444712 ITIH6Q6UXX5 1313 aa17.53■□□□□ 0.4
SNX13-204ENST00000444712 LOXHD1Q8IVV2 1947 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 PSDA5PKW4 1024 aaPredicted RBP17.52■□□□□ 0.4
SNX13-204ENST00000444712 KCNJ18B7U540 433 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 HOXA13P31271 388 aaPredicted RBP17.52■□□□□ 0.4
SNX13-204ENST00000444712 KCNJ12Q14500 433 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 LDHDQ86WU2 507 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 P2RX5Q93086 422 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 GLIS2Q9BZE0 524 aaPredicted RBP17.52■□□□□ 0.4
SNX13-204ENST00000444712 ZNF541Q9H0D2 1346 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 PARP14Q460N5 1801 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 SBF1O95248 1867 aa17.52■□□□□ 0.4
SNX13-204ENST00000444712 MYMKA6NI61 221 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 KIF2AO00139 706 aaPredicted RBP17.52■□□□□ 0.39
SNX13-204ENST00000444712 TPM2P07951 284 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 TPM1P09493 284 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 KRT31Q15323 416 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 ILDR2Q71H61 639 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 FCHSD1Q86WN1 690 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 MCF2L2Q86YR7 1114 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 GPC2Q8N158 579 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 LENG9Q96B70 501 aa17.52■□□□□ 0.39
SNX13-204ENST00000444712 P2RX7Q99572 595 aaKnown RBP17.52■□□□□ 0.39
SNX13-204ENST00000444712 MAP3K20Q9NYL2 800 aaKnown RBP17.52■□□□□ 0.39
SNX13-204ENST00000444712 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.52■□□□□ 0.39
SNX13-204ENST00000444712 LMNB1P20700 586 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 PRELPP51888 382 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 TRIM14Q14142 442 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 FOXR2Q6PJQ5 311 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 NLGN2Q8NFZ4 835 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNX13-204ENST00000444712 NUDT12Q9BQG2 462 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 ZNF112Q9UJU3 913 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 CCPG1Q9ULG6 757 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 MAPK8IP1Q9UQF2 711 aa17.51■□□□□ 0.39
SNX13-204ENST00000444712 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.51■□□□□ 0.392e-8■■■■■ 31.6
SNX13-204ENST00000444712 FAM86B1E9PN63 330 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 N4BP3O15049 544 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 FGFR1OPO95684 399 aaKnown RBP17.5■□□□□ 0.39
SNX13-204ENST00000444712 FAM86B2P0C5J1 330 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 COPB1P53618 953 aaKnown RBP17.5■□□□□ 0.39
SNX13-204ENST00000444712 SETQ01105 290 aaPredicted RBP17.5■□□□□ 0.39
SNX13-204ENST00000444712 TTI2Q6NXR4 508 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 PPFIBP1Q86W92 1011 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 SCYL3Q8IZE3 742 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 DDX12PQ92771 950 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 WDR18Q9BV38 432 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 TMX1Q9H3N1 280 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 TUBB4AP04350 444 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 RPA1P27694 616 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 PBX1P40424 430 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 SPIRE1Q08AE8 756 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 STK4Q13043 487 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 CCAR2Q8N163 923 aaKnown RBP17.5■□□□□ 0.39
SNX13-204ENST00000444712 GUF1Q8N442 669 aaKnown RBP17.5■□□□□ 0.39
SNX13-204ENST00000444712 PICK1Q9NRD5 415 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 FBXO28Q9NVF7 368 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 GPRC5DQ9NZD1 345 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 KIAA1024Q9UPX6 916 aa17.5■□□□□ 0.39
SNX13-204ENST00000444712 PITPNM2Q9BZ72 1349 aa17.49■□□□□ 0.39
SNX13-204ENST00000444712 MSH4O15457 936 aa17.49■□□□□ 0.39
SNX13-204ENST00000444712 ARHGAP6O43182 974 aa17.49■□□□□ 0.39
SNX13-204ENST00000444712 STX10O60499 249 aa17.49■□□□□ 0.39
SNX13-204ENST00000444712 NBPF12Q5TAG4 269 aaPredicted RBP17.49■□□□□ 0.39
SNX13-204ENST00000444712 CCDC65Q8IXS2 484 aa17.49■□□□□ 0.39
SNX13-204ENST00000444712 CSGALNACT2Q8N6G5 542 aa17.49■□□□□ 0.39
SNX13-204ENST00000444712 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
SNX13-204ENST00000444712 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
SNX13-204ENST00000444712 IGLV3-22A0A075B6J6 115 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 AKR1B15C9JRZ8 316 aaPredicted RBP17.48■□□□□ 0.39
SNX13-204ENST00000444712 KIF20AO95235 890 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 IDEP14735 1019 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 INPP5BP32019 993 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 HSD17B4P51659 736 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 GHRHRQ02643 423 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 ECM1Q16610 540 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 ANGEL2Q5VTE6 544 aaKnown RBP17.48■□□□□ 0.39
SNX13-204ENST00000444712 NCAPH2Q6IBW4 605 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms