RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 ARHGAP8P85298 464 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 PLEKHG4Q58EX7 1191 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 TTC39AQ5SRH9 613 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 RBM23Q86U06 439 aaKnown RBP12.29□□□□□ -0.44
HDAC8-215ENST00000444609 CLP1Q92989 425 aaKnown RBP12.29□□□□□ -0.44
HDAC8-215ENST00000444609 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 RTP3Q9BQQ7 232 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 RIOK1Q9BRS2 568 aaKnown RBP12.29□□□□□ -0.44
HDAC8-215ENST00000444609 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
HDAC8-215ENST00000444609 CDV3Q9UKY7 258 aaKnown RBP12.29□□□□□ -0.44
HDAC8-215ENST00000444609 EMSYQ7Z589 1322 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 RAD50Q92878 1312 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 ASPMQ8IZT6 3477 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.28□□□□□ -0.44
HDAC8-215ENST00000444609 PTK7Q13308 1070 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 WDR63Q8IWG1 891 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 CRIPAKQ8N1N5 446 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
HDAC8-215ENST00000444609 GPR161Q8N6U8 529 aaKnown RBP12.28□□□□□ -0.44
HDAC8-215ENST00000444609 SUMF1Q8NBK3 374 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 ATP8B4Q8TF62 1192 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 WNT8BQ93098 351 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 PLVAPQ9BX97 442 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 S1PR5Q9H228 398 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 GTF2IRD1Q9UHL9 959 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 PTPRCP08575 1304 aa12.28□□□□□ -0.44
HDAC8-215ENST00000444609 F5H6K3 240 aa12.27□□□□□ -0.45
HDAC8-215ENST00000444609 NKRFO15226 690 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDAC8-215ENST00000444609 IDH1O75874 414 aaKnown RBP12.27□□□□□ -0.45
HDAC8-215ENST00000444609 SP100P23497 879 aaPredicted RBP12.27□□□□□ -0.45
HDAC8-215ENST00000444609 KLRC3Q07444 240 aa12.27□□□□□ -0.45
HDAC8-215ENST00000444609 CCDC158Q5M9N0 1113 aa12.27□□□□□ -0.45
HDAC8-215ENST00000444609 ZC3H14Q6PJT7 736 aaKnown RBP12.27□□□□□ -0.45
HDAC8-215ENST00000444609 ZNF512BQ96KM6 892 aaPredicted RBP12.27□□□□□ -0.45
HDAC8-215ENST00000444609 RNF146Q9NTX7 359 aa12.27□□□□□ -0.45
HDAC8-215ENST00000444609 NR2E1Q9Y466 385 aa12.27□□□□□ -0.45
HDAC8-215ENST00000444609 TRIP12Q14669 1992 aaPredicted RBP12.27□□□□□ -0.45
HDAC8-215ENST00000444609 NDUFB10O96000 172 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 RBM10P98175 930 aaKnown RBP12.26□□□□□ -0.45
HDAC8-215ENST00000444609 VN1R2Q8NFZ6 395 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 SPPL3Q8TCT6 385 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 SEPT8Q92599 483 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 KAT2BQ92831 832 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 P2RX5Q93086 422 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 PURBQ96QR8 312 aaKnown RBP12.26□□□□□ -0.45
HDAC8-215ENST00000444609 CYP39A1Q9NYL5 469 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 FLNBO75369 2602 aaKnown RBP12.26□□□□□ -0.45
HDAC8-215ENST00000444609 ZFYVE26Q68DK2 2539 aa12.26□□□□□ -0.45
HDAC8-215ENST00000444609 MICAL3Q7RTP6 2002 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 RSPH10B2B2RC85 870 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 RSPH10BP0C881 870 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 CDK8P49336 464 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 LMNB2Q03252 620 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 TKFCQ3LXA3 575 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 TMED8Q6PL24 325 aaPredicted RBP12.25□□□□□ -0.45
HDAC8-215ENST00000444609 LRRC47Q8N1G4 583 aaKnown RBP12.25□□□□□ -0.45
HDAC8-215ENST00000444609 COPS5Q92905 334 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 NEK1Q96PY6 1258 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.25□□□□□ -0.45
HDAC8-215ENST00000444609 TLE6Q9H808 572 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
HDAC8-215ENST00000444609 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 HDAC6Q9UBN7 1215 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 FEM1BQ9UK73 627 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 HDAC5Q9UQL6 1122 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 ATG2AQ2TAZ0 1938 aa12.25□□□□□ -0.45
HDAC8-215ENST00000444609 C2CD4DB7Z1M9 353 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 ITGB1P05556 798 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 PPM1JQ5JR12 505 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 VARS2Q5ST30 1063 aaKnown RBP12.24□□□□□ -0.45
HDAC8-215ENST00000444609 ADGRA3Q8IWK6 1321 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 C7orf31Q8N865 590 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 RIN2Q8WYP3 895 aaPredicted RBP12.24□□□□□ -0.45
HDAC8-215ENST00000444609 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
HDAC8-215ENST00000444609 RC3H2Q9HBD1 1191 aaKnown RBP12.24□□□□□ -0.45
HDAC8-215ENST00000444609 IGSF5Q9NSI5 407 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 ANGPTL2Q9UKU9 493 aa12.24□□□□□ -0.45
HDAC8-215ENST00000444609 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 PER2O15055 1255 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 SRGAP3O43295 1099 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 PROS1P07225 676 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 ASGR2P07307 311 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 SP9P0CG40 484 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 FDX1P10109 184 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 TMEM184AQ6ZMB5 413 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 SDR42E1Q8WUS8 393 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 POF1BQ8WVV4 589 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 DBNDD2Q9BQY9 259 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 GPR108Q9NPR9 543 aa12.23□□□□□ -0.45
HDAC8-215ENST00000444609 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
HDAC8-215ENST00000444609 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
HDAC8-215ENST00000444609 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
HDAC8-215ENST00000444609 ANKRD54Q6NXT1 300 aa12.22□□□□□ -0.45
HDAC8-215ENST00000444609 SYCE2Q6PIF2 218 aa12.22□□□□□ -0.45
HDAC8-215ENST00000444609 ZNF689Q96CS4 500 aaPredicted RBP12.22□□□□□ -0.45
HDAC8-215ENST00000444609 OSBPL7Q9BZF2 842 aa12.22□□□□□ -0.45
HDAC8-215ENST00000444609 NCDNQ9UBB6 729 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms