RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 KCTD1Q719H9 257 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 TADA2BQ86TJ2 420 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 VPS36Q86VN1 386 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 GPBP1Q86WP2 473 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.35
HCFC1-203ENST00000444191 PANK4Q9NVE7 773 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 FAM53CQ9NYF3 392 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 SFI1A8K8P3 1242 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 CLIC2O15247 247 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 SRGNP10124 158 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 BTDP43251 543 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 SSR1P43307 286 aaKnown RBP12.83□□□□□ -0.36
HCFC1-203ENST00000444191 ADCY7P51828 1080 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 ADAM9Q13443 819 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 ARHGAP44Q17R89 818 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
HCFC1-203ENST00000444191 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 PACS2Q86VP3 889 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.36
HCFC1-203ENST00000444191 EPHB4P54760 987 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.361e-36■■□□□ 11.4
HCFC1-203ENST00000444191 IRF2BP1Q8IU81 584 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 CCDC170Q8IYT3 715 aa12.83□□□□□ -0.36
HCFC1-203ENST00000444191 U2AF1L4Q8WU68 220 aaKnown RBP12.83□□□□□ -0.36
HCFC1-203ENST00000444191 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
HCFC1-203ENST00000444191 NALCNQ8IZF0 1738 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 ITIH6Q6UXX5 1313 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 E9PMD0 336 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 PSMD14O00487 310 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 SCNN1DP51172 638 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 MAN2A1Q16706 1144 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 MICALCLQ6ZW33 695 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 PEX26Q7Z412 305 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 SH3RF1Q7Z6J0 888 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 CTNNBL1Q8WYA6 563 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-203ENST00000444191 CABS1Q96KC9 395 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 JPH2Q9BR39 696 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-203ENST00000444191 TNS3Q68CZ2 1445 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 FAM196BA6NMK8 535 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 MFSD14BQ5SR56 506 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 DPP8Q6V1X1 898 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-203ENST00000444191 DDX47Q9H0S4 455 aaKnown RBP12.82□□□□□ -0.36
HCFC1-203ENST00000444191 AFDNP55196 1824 aaKnown RBP12.82□□□□□ -0.36
HCFC1-203ENST00000444191 MYMKA6NI61 221 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 KRIT1O00522 736 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 CETN3O15182 167 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 PLCD4Q9BRC7 762 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 ARHGAP20Q9P2F6 1191 aa12.82□□□□□ -0.36
HCFC1-203ENST00000444191 ZNF335Q9H4Z2 1342 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 SYF2O95926 243 aaKnown RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 ACTN1P12814 892 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 ADCY1Q08828 1119 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 E2F5Q15329 346 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 SLC51AQ86UW1 340 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 CCDC65Q8IXS2 484 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 GIMAP8Q8ND71 665 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 TBCAO75347 108 aaKnown RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 PBX1P40424 430 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 IFNAR2P48551 515 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 ITPK1Q13572 414 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 TBC1D9BQ66K14 1250 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 MGARPQ8TDB4 240 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 MYCBPQ99417 103 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 ZBTB21Q9ULJ3 1066 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 GOLGA8KD6RF30 607 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 PRR16Q569H4 304 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 NAALADL2Q58DX5 795 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 EFCAB13Q8IY85 973 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 SYCP3Q8IZU3 236 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 CEP95Q96GE4 821 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 ZIM3Q96PE6 472 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 DUSP9Q99956 384 aaKnown RBP12.81□□□□□ -0.36
HCFC1-203ENST00000444191 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
HCFC1-203ENST00000444191 ARHGAP23Q9P227 1491 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L15C9J2P7 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L13C9JLJ4 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L11C9JVI0 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L18D6R9N7 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L22D6RA61 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L17D6RBQ6 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L19D6RCP7 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L20D6RJB6 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 NR1D1P20393 614 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 NR2F2P24468 414 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 STAT3P40763 770 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 GTF2IP78347 998 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L24Q0WX57 530 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 USP17L6PQ6QN14 398 aa12.8□□□□□ -0.36
HCFC1-203ENST00000444191 FNBP4Q8N3X1 1017 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-203ENST00000444191 DDX25Q9UHL0 483 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms