RNA–Protein interactions for RNA: ENST00000442952.1

SEC23IP-202, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-202ENST00000442952 LRFN3Q9BTN0 628 aa9.71□□□□□ -0.86
SEC23IP-202ENST00000442952 FTOQ9C0B1 505 aaKnown RBP eCLIP9.71□□□□□ -0.86
SEC23IP-202ENST00000442952 EPHX3Q9H6B9 360 aa9.71□□□□□ -0.86
SEC23IP-202ENST00000442952 INCENPQ9NQS7 918 aa9.71□□□□□ -0.86
SEC23IP-202ENST00000442952 NOD1Q9Y239 953 aa9.71□□□□□ -0.86
SEC23IP-202ENST00000442952 PTPRSQ13332 1948 aa9.71□□□□□ -0.86
SEC23IP-202ENST00000442952 FRMPD2Q68DX3 1309 aaPredicted RBP9.71□□□□□ -0.86
SEC23IP-202ENST00000442952 B4DLN1 442 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 PARNO95453 639 aaKnown RBP9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 PDHBP11177 359 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 MRPL12P52815 198 aaKnown RBP9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 WDR5P61964 334 aaKnown RBP9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 RPS6P62753 249 aaKnown RBP9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 RBL2Q08999 1139 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 TMEM31Q5JXX7 168 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 COPS5Q92905 334 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 CTAGE1Q96RT6 745 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 TMEM47Q9BQJ4 181 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 TCP11L1Q9NUJ3 509 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 LMCD1Q9NZU5 365 aa9.7□□□□□ -0.86
SEC23IP-202ENST00000442952 LCHNA4D1U4 455 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 GPR37L1O60883 481 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 ARIH2O95376 493 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 ZMYM6O95789 1325 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 SNHG28P0DPA3 235 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 TXNP10599 105 aaKnown RBP9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 SELPP16109 830 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 MX1P20591 662 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 ZNF543Q08ER8 600 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 ALX1Q15699 326 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 PTGISQ16647 500 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 VPS53Q5VIR6 699 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 CCDC62Q6P9F0 684 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 TMEM92Q6UXU6 159 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 LRRC8DQ7L1W4 858 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 SPRED2Q7Z698 418 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 TET1Q8NFU7 2136 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 OTUD7AQ8TE49 926 aaPredicted RBP9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 PPP1R13LQ8WUF5 828 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 MAF1Q9H063 256 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 GPCPD1Q9NPB8 672 aa9.69□□□□□ -0.86
SEC23IP-202ENST00000442952 XIRP2A4UGR9 3374 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 SALL3Q9BXA9 1300 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 EFCAB14O75071 495 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 CXCL10P02778 98 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 MMP3P08254 477 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 PCP11498 1178 aaKnown RBP9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 DEFB103AP81534 67 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 GPNMBQ14956 572 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 GDF6Q6KF10 455 aaPredicted RBP9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 CNKSR3Q6P9H4 555 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 RGS22Q8NE09 1264 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 DHX38Q92620 1227 aaKnown RBP9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 TTC14Q96N46 770 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 C11orf16Q9NQ32 467 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 SIP14410 1827 aa9.68□□□□□ -0.86
SEC23IP-202ENST00000442952 ABHD14A-ACY1A0A1B0GW23 586 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 PI4K2BG5E9Z4 385 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 NBNO60934 754 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 GJB5O95377 273 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 GH1P01241 217 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 ERVK-21P61565 698 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 ARHGAP1Q07960 439 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 RRP12Q5JTH9 1297 aaKnown RBP9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 GPATCH4Q5T3I0 446 aaKnown RBP9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 KAT2BQ92831 832 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 KHSRPQ92945 711 aaKnown RBP eCLIP9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 EVI5LQ96CN4 794 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 TGS1Q96RS0 853 aaKnown RBP9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 RAD9AQ99638 391 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 ZBED2Q9BTP6 218 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 KATNAL1Q9BW62 490 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 SUGCTQ9HAC7 445 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 GTF2IRD1Q9UHL9 959 aa9.67□□□□□ -0.86
SEC23IP-202ENST00000442952 REV3LO60673 3130 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 LINC01553A4QN01 128 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 F2P00734 622 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 FGAP02671 866 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 CKBP12277 381 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 CASTP20810 708 aaKnown RBP9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 EMP3P54852 163 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 CHMP4BP1P59074 171 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 DGKDQ16760 1214 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 USH1GQ495M9 461 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 TMCO2Q7Z6W1 182 aaPredicted RBP9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 TICAM2Q86XR7 235 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 NSUN6Q8TEA1 469 aaKnown RBP9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 UBE2ZQ9H832 354 aaPredicted RBP9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 TRIP12Q14669 1992 aaPredicted RBP9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 BDP1A6H8Y1 2624 aa9.66□□□□□ -0.86
SEC23IP-202ENST00000442952 COL4A6Q14031 1691 aa9.65□□□□□ -0.86
SEC23IP-202ENST00000442952 ABCB11O95342 1321 aa9.65□□□□□ -0.86
SEC23IP-202ENST00000442952 KIAA1217Q5T5P2 1943 aa9.65□□□□□ -0.86
SEC23IP-202ENST00000442952 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.65□□□□□ -0.86
SEC23IP-202ENST00000442952 A0A0D9SFI3 127 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms