RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 SNAPC2Q13487 334 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 PDIA5Q14554 519 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 ZNF174Q15697 407 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 TMEM266Q2M3C6 531 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 Q4G0T1 1027 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 JAKMIP3Q5VZ66 844 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 LHX8Q68G74 356 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 DTHD1Q6ZMT9 781 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 NIPA1Q7RTP0 329 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
NR1I3-211ENST00000442691 CCDC84Q86UT8 332 aaPredicted RBP10.29□□□□□ -0.76
NR1I3-211ENST00000442691 SLFN12Q8IYM2 578 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 REPS2Q8NFH8 660 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 FAM20AQ96MK3 541 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 REPIN1Q9BWE0 567 aaKnown RBP10.29□□□□□ -0.76
NR1I3-211ENST00000442691 TNMDQ9H2S6 317 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 CUEDC2Q9H467 287 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 GOLPH3LQ9H4A5 285 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 FBXO28Q9NVF7 368 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 FBXO40Q9UH90 709 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 KCNH3Q9ULD8 1083 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
NR1I3-211ENST00000442691 RBBP6Q7Z6E9 1792 aaKnown RBP10.29□□□□□ -0.76
NR1I3-211ENST00000442691 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
NR1I3-211ENST00000442691 ADAMTS3O15072 1205 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 CCNT1O60563 726 aaKnown RBP10.28□□□□□ -0.76
NR1I3-211ENST00000442691 ZNF202O95125 648 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 MYL1P05976 194 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 BCRP11274 1271 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 COL9A1P20849 921 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 ARHGAP4P98171 946 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-211ENST00000442691 LETM2Q2VYF4 491 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 USH1GQ495M9 461 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 NOM1Q5C9Z4 860 aaKnown RBP10.28□□□□□ -0.76
NR1I3-211ENST00000442691 L1TD1Q5T7N2 865 aaKnown RBP10.28□□□□□ -0.76
NR1I3-211ENST00000442691 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 IGSF22Q8N9C0 903 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 MTMR9Q96QG7 549 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 CCSER1Q9C0I3 900 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-211ENST00000442691 PNMA3Q9UL41 463 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-211ENST00000442691 PTPRFP10586 1907 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 RPTORQ8N122 1335 aa10.28□□□□□ -0.76
NR1I3-211ENST00000442691 RLFQ13129 1914 aa10.27□□□□□ -0.76
NR1I3-211ENST00000442691 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
NR1I3-211ENST00000442691 A0A1B0GVL5 298 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 GOLGA6L3A6NEY3 463 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 WNT7AO00755 349 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 SLFN14P0C7P3 912 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 CALCRLQ16602 461 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 UBE2SQ16763 222 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 CCDC174Q6PII3 467 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 OPTNQ96CV9 577 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 ATG4CQ96DT6 458 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 SLC10A4Q96EP9 437 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 GTPBP4Q9BZE4 634 aaKnown RBP10.27□□□□□ -0.77
NR1I3-211ENST00000442691 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
NR1I3-211ENST00000442691 ELP3Q9H9T3 547 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 RRAGCQ9HB90 399 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 ZCCHC17Q9NP64 241 aaKnown RBP10.27□□□□□ -0.77
NR1I3-211ENST00000442691 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 TMEM260Q9NX78 707 aa10.27□□□□□ -0.77
NR1I3-211ENST00000442691 DDX25Q9UHL0 483 aaKnown RBP10.27□□□□□ -0.77
NR1I3-211ENST00000442691 LOC102724159A0A0B4J2E5 919 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 SYCE3A1L190 88 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 VWA3AA6NCI4 1184 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 PPP1R3GB7ZBB8 358 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 STAM2O75886 525 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 SLC25A27O95847 323 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 CFBP00751 764 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 CETPP11597 493 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 MRE11P49959 708 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 GTF2A2P52657 109 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 IRX3P78415 501 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-211ENST00000442691 PRKG1Q13976 671 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 PWP2Q15269 919 aaKnown RBP10.26□□□□□ -0.77
NR1I3-211ENST00000442691 MAP1SQ66K74 1059 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-211ENST00000442691 KRBA2Q6ZNG9 492 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 IQUBQ8NA54 791 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
NR1I3-211ENST00000442691 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 CLIC6Q96NY7 704 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 SDF4Q9BRK5 362 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 TSPY26PQ9H489 355 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 PFASO15067 1338 aa10.26□□□□□ -0.77
NR1I3-211ENST00000442691 EDIL3O43854 480 aa10.25□□□□□ -0.77
NR1I3-211ENST00000442691 MUTP22033 750 aa10.25□□□□□ -0.77
NR1I3-211ENST00000442691 MOGSQ13724 837 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms