RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
LINC00642-202ENST00000442515 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
LINC00642-202ENST00000442515 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
LINC00642-202ENST00000442515 IL17RBQ9NRM6 502 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 DMDP11532 3685 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 PATL2C9JE40 543 aaKnown RBP16.47■□□□□ 0.23
LINC00642-202ENST00000442515 RNF113AO15541 343 aaKnown RBP16.47■□□□□ 0.23
LINC00642-202ENST00000442515 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
LINC00642-202ENST00000442515 PPARAQ07869 468 aa16.47■□□□□ 0.23
LINC00642-202ENST00000442515 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
LINC00642-202ENST00000442515 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
LINC00642-202ENST00000442515 SYDE2Q5VT97 1194 aa16.47■□□□□ 0.23
LINC00642-202ENST00000442515 WNT8BQ93098 351 aa16.47■□□□□ 0.23
LINC00642-202ENST00000442515 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
LINC00642-202ENST00000442515 CLDND1Q9NY35 253 aa16.47■□□□□ 0.23
LINC00642-202ENST00000442515 MYH7P12883 1935 aa16.47■□□□□ 0.23
LINC00642-202ENST00000442515 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 H3BNC9 293 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 LGR5O75473 907 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 AMHP03971 560 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 PTPN5P54829 565 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 ARHGAP1Q07960 439 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 GPM6BQ13491 265 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 TRIM71Q2Q1W2 868 aaKnown RBP16.46■□□□□ 0.23
LINC00642-202ENST00000442515 ZNF618Q5T7W0 954 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 CCDC62Q6P9F0 684 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 BTNL9Q6UXG8 535 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 DNERQ8NFT8 737 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 DCAF4Q8WV16 495 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 SAMD11Q96NU1 681 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 NACAP1Q9BZK3 213 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 HDAC6Q9UBN7 1215 aa16.46■□□□□ 0.23
LINC00642-202ENST00000442515 ZFYP08048 801 aaPredicted RBP16.45■□□□□ 0.22
LINC00642-202ENST00000442515 LTBRP36941 435 aa16.45■□□□□ 0.22
LINC00642-202ENST00000442515 PTK7Q13308 1070 aa16.45■□□□□ 0.22
LINC00642-202ENST00000442515 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
LINC00642-202ENST00000442515 IER5LQ5T953 404 aa16.45■□□□□ 0.22
LINC00642-202ENST00000442515 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
LINC00642-202ENST00000442515 C7orf31Q8N865 590 aa16.45■□□□□ 0.22
LINC00642-202ENST00000442515 POP1Q99575 1024 aaKnown RBP16.45■□□□□ 0.22
LINC00642-202ENST00000442515 NAPBQ9H115 298 aa16.45■□□□□ 0.22
LINC00642-202ENST00000442515 ECHDC1Q9NTX5 307 aa16.45■□□□□ 0.22
LINC00642-202ENST00000442515 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC00642-202ENST00000442515 SMARCA5O60264 1052 aaPredicted RBP16.44■□□□□ 0.22
LINC00642-202ENST00000442515 GH1P01241 217 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
LINC00642-202ENST00000442515 CLUL1Q15846 466 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 LY6KQ17RY6 165 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 CHST3Q7LGC8 479 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 RNF135Q8IUD6 432 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 DBF4BQ8NFT6 615 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 YME1L1Q96TA2 773 aa16.44■□□□□ 0.22
LINC00642-202ENST00000442515 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
LINC00642-202ENST00000442515 B4DLN1 442 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 NOVP48745 357 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 PSEN2P49810 448 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
LINC00642-202ENST00000442515 DGKDQ16760 1214 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 TMEM192Q8IY95 271 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
LINC00642-202ENST00000442515 ALG1Q9BT22 464 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 KATNAL1Q9BW62 490 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 LRRCC1Q9C099 1032 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 INCENPQ9NQS7 918 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 EMSYQ7Z589 1322 aa16.43■□□□□ 0.22
LINC00642-202ENST00000442515 MBTPS2O43462 519 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 F2P00734 622 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 ZNF286BP0CG31 522 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 ZNF200P98182 395 aaPredicted RBP16.42■□□□□ 0.22
LINC00642-202ENST00000442515 DLX2Q07687 328 aaPredicted RBP16.42■□□□□ 0.22
LINC00642-202ENST00000442515 TCF15Q12870 199 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 MFSD10Q14728 455 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 KIAA0753Q2KHM9 967 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 SEPT14Q6ZU15 432 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 BMP8AQ7Z5Y6 402 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 EDAQ92838 391 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 GPCPD1Q9NPB8 672 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 TECTAO75443 2155 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 DCHS1Q96JQ0 3298 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
LINC00642-202ENST00000442515 TRIP12Q14669 1992 aaPredicted RBP16.41■□□□□ 0.22
LINC00642-202ENST00000442515 NCK2O43639 380 aa16.41■□□□□ 0.22
LINC00642-202ENST00000442515 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
LINC00642-202ENST00000442515 GFRA3O60609 400 aa16.41■□□□□ 0.22
LINC00642-202ENST00000442515 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
LINC00642-202ENST00000442515 PLEKHG4Q58EX7 1191 aa16.41■□□□□ 0.22
LINC00642-202ENST00000442515 PRRX2Q99811 253 aa16.41■□□□□ 0.22
LINC00642-202ENST00000442515 PNMA2Q9UL42 364 aa16.41■□□□□ 0.22
LINC00642-202ENST00000442515 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
LINC00642-202ENST00000442515 TMEM221A6NGB7 291 aa16.4■□□□□ 0.22
LINC00642-202ENST00000442515 RSPH10B2B2RC85 870 aa16.4■□□□□ 0.22
LINC00642-202ENST00000442515 M0R296 226 aa16.4■□□□□ 0.22
LINC00642-202ENST00000442515 HAS3O00219 553 aa16.4■□□□□ 0.22
LINC00642-202ENST00000442515 TBX10O75333 385 aa16.4■□□□□ 0.22
LINC00642-202ENST00000442515 RSPH10BP0C881 870 aa16.4■□□□□ 0.22
LINC00642-202ENST00000442515 THPOP40225 353 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms