RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SNX4O95219 450 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 CNOT4O95628 575 aaKnown RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 MT-ND3P03897 115 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 ATP6V1B1P15313 513 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 CHKAP35790 457 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 NFKB2Q00653 900 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 G3BP1Q13283 466 aaKnown RBP eCLIP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 CCNG2Q16589 344 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 HECTD3Q5T447 861 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 TAOK1Q7L7X3 1001 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 RNF168Q8IYW5 571 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 AADATQ8N5Z0 425 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 TRIML2Q8N7C3 387 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 PLPP7Q8NBV4 271 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 TRPM4Q8TD43 1214 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 ANKRD7Q92527 254 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 VCX3BQ9H321 246 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 CYLDQ9NQC7 956 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 HOXC11O43248 304 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 PYGLP06737 847 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 GBE1Q04446 702 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 DMPKQ09013 629 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 RBBP5Q15291 538 aaKnown RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 INTS11Q5TA45 600 aaKnown RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 GALNT6Q8NCL4 622 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 PURBQ96QR8 312 aaKnown RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 CCDC8Q9H0W5 538 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 FNIP2Q9P278 1114 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 ADGRF5Q8IZF2 1346 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 TGDSO95455 350 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 XPAP23025 273 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 SMTNP53814 917 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 BNC2Q6ZN30 1099 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 MFSD6Q6ZSS7 791 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 NRSN1Q8IZ57 195 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 TEKT4Q8WW24 435 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 CNDP2Q96KP4 475 aaKnown RBP11.72□□□□□ -0.53
SYNE2-206ENST00000441438 PHACTR1Q9C0D0 580 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 DMTF1Q9Y222 760 aa11.72□□□□□ -0.53
SYNE2-206ENST00000441438 COL14A1Q05707 1796 aaKnown RBP11.71□□□□□ -0.53
SYNE2-206ENST00000441438 BIN1O00499 593 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 EPN2O95208 641 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 MYCP01106 439 aaPredicted RBP11.71□□□□□ -0.53
SYNE2-206ENST00000441438 MAPK8P45983 427 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 TRIM14Q14142 442 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 NEDD9Q14511 834 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 NLRP10Q86W26 655 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 HIC2Q96JB3 615 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 RRN3Q9NYV6 651 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 USP19O94966 1318 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 KDM1AO60341 852 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 STAT3P40763 770 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 DGKGP49619 791 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 SUZ12Q15022 739 aaKnown RBP11.71□□□□□ -0.53
SYNE2-206ENST00000441438 TMEM132EQ6IEE7 984 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 INTS8Q75QN2 995 aaKnown RBP11.71□□□□□ -0.53
SYNE2-206ENST00000441438 POF1BQ8WVV4 589 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 CCDC114Q96M63 670 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 PLVAPQ9BX97 442 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 TBC1D22BQ9NU19 505 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 SIRT5Q9NXA8 310 aa11.71□□□□□ -0.53
SYNE2-206ENST00000441438 PPARGC1AQ9UBK2 798 aaKnown RBP11.71□□□□□ -0.53
SYNE2-206ENST00000441438 MTF2Q9Y483 593 aaPredicted RBP11.71□□□□□ -0.53
SYNE2-206ENST00000441438 USP31Q70CQ4 1352 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 FAM196BA6NMK8 535 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 ZBTB43O43298 467 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 CTSHP09668 335 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 ICA1Q05084 483 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 MTMR1Q13613 665 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 KDELC1Q6UW63 502 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 ILDR2Q71H61 639 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 DGLUCYQ7Z3D6 616 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 SIX5Q8N196 739 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 NAXEQ8NCW5 288 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 NAP1L3Q99457 506 aaPredicted RBP11.71□□□□□ -0.54
SYNE2-206ENST00000441438 MTRQ99707 1265 aa11.71□□□□□ -0.54
SYNE2-206ENST00000441438 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 RDXP35241 583 aaKnown RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 CBX1P83916 185 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 MPP1Q00013 466 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 DEPDC4Q8N2C3 294 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 BAP1Q92560 729 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 GJA10Q969M2 543 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 NUDT16L1Q9BRJ7 211 aaKnown RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 ZNF180Q9UJW8 692 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 JCADQ9P266 1359 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 TREHO43280 583 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 ALAS1P13196 640 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 PPP2R1AP30153 589 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 NMIQ13287 307 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 ATF7IPQ6VMQ6 1270 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 FASTKD5Q7L8L6 764 aaKnown RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 CCDC84Q86UT8 332 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 COLGALT2Q8IYK4 626 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms