RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 LCTP09848 1927 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 ZEB2O60315 1214 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 SYN1P17600 705 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 NAPAP54920 295 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 MRPS9P82933 396 aaKnown RBP18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 UBE2SQ16763 222 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 CXCL17Q6UXB2 119 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 PHKBQ93100 1093 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 ZFP91Q96JP5 570 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 GLT1D1Q96MS3 346 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 RIC8AQ9NPQ8 531 aa18.32■□□□□ 0.52
TRAPPC12-209ENST00000441099 A6NJR5 290 aa18.31■□□□□ 0.52
TRAPPC12-209ENST00000441099 SCG2P13521 617 aa18.31■□□□□ 0.52
TRAPPC12-209ENST00000441099 CDK7P50613 346 aa18.31■□□□□ 0.52
TRAPPC12-209ENST00000441099 TLE2Q04725 743 aa18.31■□□□□ 0.52
TRAPPC12-209ENST00000441099 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
TRAPPC12-209ENST00000441099 PCDH10Q9P2E7 1040 aa18.31■□□□□ 0.52
TRAPPC12-209ENST00000441099 MRVI1Q9Y6F6 885 aa18.31■□□□□ 0.52
TRAPPC12-209ENST00000441099 SMCO2A6NFE2 343 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 STAM2O75886 525 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 CABYRO75952 493 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 GH1P01241 217 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 CPT1AP50416 773 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 ARHGAP1Q07960 439 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 XRRA1Q6P2D8 792 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 ANKRD33Q7Z3H0 272 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 SLC43A3Q8NBI5 491 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 VTI1AQ96AJ9 217 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 PRO3102Q9H379 93 aa18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-209ENST00000441099 DNAH12Q6ZR08 3092 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 LRRC37A2A6NM11 1700 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 GRIN2DO15399 1336 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 TGFB3P10600 412 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 AK2P54819 239 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 PURAQ00577 322 aaKnown RBP18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 STK3Q13188 491 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 PCNX4Q63HM2 1172 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 KCNV1Q6PIU1 500 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 EMID1Q96A84 441 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 TOX2Q96NM4 488 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 SLC26A6Q9BXS9 759 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 TPCN1Q9ULQ1 816 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 PCDHA6Q9UN73 950 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 COLQQ9Y215 455 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 PCDHA8Q9Y5H6 950 aa18.29■□□□□ 0.52
TRAPPC12-209ENST00000441099 SPATA31C2B4DYI2 1134 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 ARVCFO00192 962 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 PQBP1O60828 265 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 ICAM3P32942 547 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 CLK2P49760 499 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 ADCY7P51828 1080 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 AKAP17AQ02040 695 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 SP2Q02086 613 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 SCRN1Q12765 414 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 SEMA3FQ13275 785 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 AFG1LQ8WV93 481 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 GDF15Q99988 308 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
TRAPPC12-209ENST00000441099 BAZ2BQ9UIF8 2168 aaKnown RBP18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 ESYT2A0FGR8 921 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 TRIM43BA6NCK2 446 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 SPDYE3A6NKU9 549 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 PFKFB2O60825 505 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 MYL3P08590 195 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 UBA1P22314 1058 aaKnown RBP18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 PSMC6P62333 389 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 FAAP100Q0VG06 881 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 LAMC2Q13753 1193 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 GNPTABQ3T906 1256 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 BRDTQ58F21 947 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 CELF3Q5SZQ8 465 aaKnown RBP18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 SH3RF1Q7Z6J0 888 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 TRIM43Q96BQ3 446 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 ZMYND12Q9H0C1 365 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 GLT8D2Q9H1C3 349 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 FRMPD3Q5JV73 1810 aa18.27■□□□□ 0.52
TRAPPC12-209ENST00000441099 CPLX1O14810 134 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 ADAMTS3O15072 1205 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 KPNA6O60684 536 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 FOSP01100 380 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 MMP3P08254 477 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 CLTBP09497 229 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 MAGEA10P43363 369 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 NEK4P51957 841 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 SSRP1Q08945 709 aaKnown RBP18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 ITGA7Q13683 1181 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 MYSM1Q5VVJ2 828 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 DHX37Q8IY37 1157 aaKnown RBP18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 KIF2CQ99661 725 aa18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 MTG1Q9BT17 334 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-209ENST00000441099 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms