RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 NBNO60934 754 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 NEDD4P46934 1319 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 DEFB103AP81534 67 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 CDC37Q16543 378 aaPredicted RBP15.3■□□□□ 0.04
SP4-203ENST00000440636 TCTN1Q2MV58 587 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 LRRC8DQ7L1W4 858 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 DGKHQ86XP1 1220 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 NSUN6Q8TEA1 469 aaKnown RBP15.3■□□□□ 0.04
SP4-203ENST00000440636 ZKSCAN3Q9BRR0 538 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 GTF2IRD1Q9UHL9 959 aa15.3■□□□□ 0.04
SP4-203ENST00000440636 ABCB11O95342 1321 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 PARNO95453 639 aaKnown RBP15.29■□□□□ 0.04
SP4-203ENST00000440636 CKBP12277 381 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 CASTP20810 708 aaKnown RBP15.29■□□□□ 0.04
SP4-203ENST00000440636 CNKSR3Q6P9H4 555 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 CHST3Q7LGC8 479 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 GDPD5Q8WTR4 605 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 ESR2Q92731 530 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 IWS1Q96ST2 819 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 LRFN3Q9BTN0 628 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 RNF41Q9H4P4 317 aaPredicted RBP15.29■□□□□ 0.04
SP4-203ENST00000440636 LMCD1Q9NZU5 365 aa15.29■□□□□ 0.04
SP4-203ENST00000440636 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
SP4-203ENST00000440636 DDX41Q9UJV9 622 aaKnown RBP15.29■□□□□ 0.04
SP4-203ENST00000440636 GJB5O95377 273 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 STXBP2Q15833 593 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 DGKDQ16760 1214 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 ADGRF4Q8IZF3 695 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 PNMA1Q8ND90 353 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 EMID1Q96A84 441 aaPredicted RBP15.28■□□□□ 0.04
SP4-203ENST00000440636 RMDN3Q96TC7 470 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 HDAC6Q9UBN7 1215 aa15.28■□□□□ 0.04
SP4-203ENST00000440636 PIEZO1Q92508 2521 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 ABHD14A-ACY1A0A1B0GW23 586 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 F2P00734 622 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 PSEN2P49810 448 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 TRIM71Q2Q1W2 868 aaKnown RBP15.27■□□□□ 0.04
SP4-203ENST00000440636 QRICH1Q2TAL8 776 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 TRAF7Q6Q0C0 670 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 MCF2L2Q86YR7 1114 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 C7orf31Q8N865 590 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 ANKS1AQ92625 1134 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 KHSRPQ92945 711 aaKnown RBP eCLIP15.27■□□□□ 0.04
SP4-203ENST00000440636 RAD9AQ99638 391 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 SUGCTQ9HAC7 445 aa15.27■□□□□ 0.04
SP4-203ENST00000440636 MYH6P13533 1939 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 LINC01553A4QN01 128 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 HAS3O00219 553 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 EIF3JO75822 258 aaKnown RBP15.26■□□□□ 0.03
SP4-203ENST00000440636 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 NT5C2P49902 561 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 ERVK-21P61565 698 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 PTK7Q13308 1070 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 MFSD10Q14728 455 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 ARHGEF16Q5VV41 709 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 PPTC7Q8NI37 304 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 WNT8BQ93098 351 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
SP4-203ENST00000440636 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 KATNAL1Q9BW62 490 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 MTUS1Q9ULD2 1270 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 MRPL11Q9Y3B7 192 aaKnown RBP15.26■□□□□ 0.03
SP4-203ENST00000440636 ARIH1Q9Y4X5 557 aaPredicted RBP15.26■□□□□ 0.03
SP4-203ENST00000440636 LAMA4Q16363 1823 aa15.26■□□□□ 0.03
SP4-203ENST00000440636 MUC6Q6W4X9 2439 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 SIP14410 1827 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 ZNF213O14771 459 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 EFCAB14O75071 495 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 KDM4AO75164 1064 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 NR3C2P08235 984 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 HOXD8P13378 290 aaPredicted RBP15.25■□□□□ 0.03
SP4-203ENST00000440636 EIF2AK2P19525 551 aaKnown RBP15.25■□□□□ 0.03
SP4-203ENST00000440636 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
SP4-203ENST00000440636 HDAC1Q13547 482 aaPredicted RBP15.25■□□□□ 0.03
SP4-203ENST00000440636 LAMC2Q13753 1193 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 KIAA0753Q2KHM9 967 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 ASPRV1Q53RT3 343 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 CCDC178Q5BJE1 867 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 TMEM31Q5JXX7 168 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 ZNF618Q5T7W0 954 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 IQCA1Q86XH1 822 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 FBXO11Q86XK2 927 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 KAT14Q9H8E8 782 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 CD320Q9NPF0 282 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 C11orf16Q9NQ32 467 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 PXMP2Q9NR77 195 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 MRVI1Q9Y6F6 885 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 MYH7BA7E2Y1 1941 aa15.25■□□□□ 0.03
SP4-203ENST00000440636 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.24■□□□□ 0.03
SP4-203ENST00000440636 OPLAHO14841 1288 aa15.24■□□□□ 0.03
SP4-203ENST00000440636 SDSP20132 328 aa15.24■□□□□ 0.03
SP4-203ENST00000440636 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
SP4-203ENST00000440636 ZNF200P98182 395 aaPredicted RBP15.24■□□□□ 0.03
SP4-203ENST00000440636 GHRHRQ02643 423 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms