RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 VPS54Q9P1Q0 977 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 PHF24Q9UPV7 400 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 ADAMTS3O15072 1205 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 DYNC1LI2O43237 492 aaPredicted RBP20.7■□□□□ 0.9
CPSF4-205ENST00000440514 EIF3JO75822 258 aaKnown RBP20.7■□□□□ 0.9
CPSF4-205ENST00000440514 RGS20O76081 388 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 TXNP10599 105 aaKnown RBP20.7■□□□□ 0.9
CPSF4-205ENST00000440514 TTLL4Q14679 1199 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 CCSAPQ6IQ19 270 aaPredicted RBP20.7■□□□□ 0.9
CPSF4-205ENST00000440514 VSIG10LQ86VR7 867 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 GTF3C6Q969F1 213 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 AIFM3Q96NN9 605 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 AP5M1Q9H0R1 490 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 TMEM260Q9NX78 707 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 PDE4DIPQ5VU43 2346 aa20.7■□□□□ 0.9
CPSF4-205ENST00000440514 SPDYE3A6NKU9 549 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 CTDNEP1O95476 244 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 ATN1P54259 1190 aaPredicted RBP20.69■□□□□ 0.9
CPSF4-205ENST00000440514 MRPS9P82933 396 aaKnown RBP20.69■□□□□ 0.9
CPSF4-205ENST00000440514 ST3GAL1Q11201 340 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 KCNA10Q16322 511 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 LRRC26Q2I0M4 334 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 CCDC62Q6P9F0 684 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 OR6J1Q8NGC5 347 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 DPF3Q92784 378 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 TBC1D32Q96NH3 1257 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 PCDHA6Q9UN73 950 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 PCDHA8Q9Y5H6 950 aa20.69■□□□□ 0.9
CPSF4-205ENST00000440514 A0A1W2PQ45 241 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-205ENST00000440514 A0A1W2PQY0 241 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 ESYT2A0FGR8 921 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 CDKL5O76039 1030 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 DEXIO95424 95 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 ACLYP53396 1101 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 NKX3-2P78367 333 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 FSCN1Q16658 493 aaKnown RBP20.68■□□□□ 0.9
CPSF4-205ENST00000440514 LY6KQ17RY6 165 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 GNASQ5JWF2 1037 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 PCNX4Q63HM2 1172 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 CCDC12Q8WUD4 166 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-205ENST00000440514 TSEN34Q9BSV6 310 aaKnown RBP20.68■□□□□ 0.9
CPSF4-205ENST00000440514 BACH2Q9BYV9 841 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 ZMYND12Q9H0C1 365 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 Q9Y3F1 56 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 MRVI1Q9Y6F6 885 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 STK36Q9NRP7 1315 aa20.68■□□□□ 0.9
CPSF4-205ENST00000440514 NKRFO15226 690 aaKnown RBP eCLIP20.67■□□□□ 0.9
CPSF4-205ENST00000440514 ASGR1P07306 291 aa20.67■□□□□ 0.9
CPSF4-205ENST00000440514 CLK2P49760 499 aaKnown RBP20.67■□□□□ 0.9
CPSF4-205ENST00000440514 RABEP1Q15276 862 aa20.67■□□□□ 0.9
CPSF4-205ENST00000440514 CCDC148Q8NFR7 591 aa20.67■□□□□ 0.9
CPSF4-205ENST00000440514 ANO3Q9BYT9 981 aa20.67■□□□□ 0.9
CPSF4-205ENST00000440514 C6orf50Q9HD87 102 aa20.67■□□□□ 0.9
CPSF4-205ENST00000440514 RTEL1Q9NZ71 1219 aa20.67■□□□□ 0.9
CPSF4-205ENST00000440514 MOXD2PA6NHM9 499 aa20.66■□□□□ 0.9
CPSF4-205ENST00000440514 ARHGAP1Q07960 439 aa20.66■□□□□ 0.9
CPSF4-205ENST00000440514 JAKMIP3Q5VZ66 844 aa20.66■□□□□ 0.9
CPSF4-205ENST00000440514 C7orf61Q8IZ16 206 aa20.66■□□□□ 0.9
CPSF4-205ENST00000440514 PCSK9Q8NBP7 692 aaKnown RBP20.66■□□□□ 0.9
CPSF4-205ENST00000440514 RASGRP4Q8TDF6 673 aa20.66■□□□□ 0.9
CPSF4-205ENST00000440514 INPP4AQ96PE3 977 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-205ENST00000440514 GLT8D2Q9H1C3 349 aa20.66■□□□□ 0.9
CPSF4-205ENST00000440514 LIMCH1Q9UPQ0 1083 aa20.66■□□□□ 0.9
CPSF4-205ENST00000440514 EVI5O60447 810 aa20.65■□□□□ 0.9
CPSF4-205ENST00000440514 SORBS3O60504 671 aa20.65■□□□□ 0.9
CPSF4-205ENST00000440514 GH1P01241 217 aa20.65■□□□□ 0.9
CPSF4-205ENST00000440514 AP3B2Q13367 1082 aa20.65■□□□□ 0.9
CPSF4-205ENST00000440514 REXO1Q8N1G1 1221 aaKnown RBP20.65■□□□□ 0.9
CPSF4-205ENST00000440514 EHMT1Q9H9B1 1298 aa20.65■□□□□ 0.9
CPSF4-205ENST00000440514 DDX41Q9UJV9 622 aaKnown RBP20.65■□□□□ 0.9
CPSF4-205ENST00000440514 DOCK5Q9H7D0 1870 aa20.64■□□□□ 0.9
CPSF4-205ENST00000440514 JAK2O60674 1132 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 STAM2O75886 525 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 FOSP01100 380 aaPredicted RBP20.64■□□□□ 0.89
CPSF4-205ENST00000440514 UBA1P22314 1058 aaKnown RBP20.64■□□□□ 0.89
CPSF4-205ENST00000440514 RTP1P59025 263 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 NLRP5P59047 1200 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 SEMA3FQ13275 785 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 GNPTABQ3T906 1256 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 XRRA1Q6P2D8 792 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 CXCL17Q6UXB2 119 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 SLC39A5Q6ZMH5 540 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 TEX2Q8IWB9 1127 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 CCDC83Q8IWF9 413 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 NSUN7Q8NE18 718 aaKnown RBP20.64■□□□□ 0.89
CPSF4-205ENST00000440514 STARD7Q9NQZ5 370 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 SH3GLB2Q9NR46 395 aa20.64■□□□□ 0.89
CPSF4-205ENST00000440514 GNA11P29992 359 aa20.63■□□□□ 0.89
CPSF4-205ENST00000440514 CPT1AP50416 773 aa20.63■□□□□ 0.89
CPSF4-205ENST00000440514 SNX17Q15036 470 aa20.63■□□□□ 0.89
CPSF4-205ENST00000440514 TRIM60Q495X7 471 aa20.63■□□□□ 0.89
CPSF4-205ENST00000440514 AFG1LQ8WV93 481 aa20.63■□□□□ 0.89
CPSF4-205ENST00000440514 GLT1D1Q96MS3 346 aa20.63■□□□□ 0.89
CPSF4-205ENST00000440514 ORC3Q9UBD5 711 aaPredicted RBP20.63■□□□□ 0.89
CPSF4-205ENST00000440514 ATP11BQ9Y2G3 1177 aa20.63■□□□□ 0.89
CPSF4-205ENST00000440514 FIBPO43427 364 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 CD2BP2O95400 341 aaKnown RBP20.62■□□□□ 0.89
CPSF4-205ENST00000440514 GGPS1O95749 300 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 MYL3P08590 195 aa20.62■□□□□ 0.89
CPSF4-205ENST00000440514 FDPSP14324 419 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms