RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PDCD2LQ9BRP1 358 aa22.94■■□□□ 1.26
SHROOM1-204ENST00000440118 ALDH8A1Q9H2A2 487 aaPredicted RBP22.94■■□□□ 1.26
SHROOM1-204ENST00000440118 NOD1Q9Y239 953 aa22.94■■□□□ 1.26
SHROOM1-204ENST00000440118 LAMA2P24043 3122 aaKnown RBP22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 CENPBP07199 599 aaPredicted RBP22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 SUPT20HL2P0C7V6 817 aa22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 CSF2RAP15509 400 aa22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 PGM5Q15124 567 aa22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 CCDC62Q6P9F0 684 aa22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 PSRC1Q6PGN9 363 aaPredicted RBP22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 SMARCC2Q8TAQ2 1214 aa22.93■■□□□ 1.26
SHROOM1-204ENST00000440118 PLEKHA8P1O95397 391 aa22.92■■□□□ 1.26
SHROOM1-204ENST00000440118 MMP3P08254 477 aa22.92■■□□□ 1.26
SHROOM1-204ENST00000440118 FGD1P98174 961 aa22.92■■□□□ 1.26
SHROOM1-204ENST00000440118 KRT32Q14532 448 aa22.92■■□□□ 1.26
SHROOM1-204ENST00000440118 NBPF20Q3BBV1 942 aa22.92■■□□□ 1.26
SHROOM1-204ENST00000440118 TRMT13Q9NUP7 481 aaKnown RBP22.92■■□□□ 1.26
SHROOM1-204ENST00000440118 CASTP20810 708 aaKnown RBP22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 SMARCA1P28370 1054 aa22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 CCL23P55773 120 aa22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 ARHGAP1Q07960 439 aa22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 KCNV1Q6PIU1 500 aa22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 DHX37Q8IY37 1157 aaKnown RBP22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 CMTR1Q8N1G2 835 aaKnown RBP22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 FAM161BQ96MY7 647 aa22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.91■■□□□ 1.262e-6■■■□□ 16.3
SHROOM1-204ENST00000440118 DDX41Q9UJV9 622 aaKnown RBP22.91■■□□□ 1.26
SHROOM1-204ENST00000440118 ACRP10323 421 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 SMAD3P84022 425 aaKnown RBP22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 LAMC2Q13753 1193 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 DGKDQ16760 1214 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 GNPTABQ3T906 1256 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 NFRKBQ6P4R8 1299 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 CCDC82Q8N4S0 544 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 IL31RAQ8NI17 732 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 PPP1R13LQ8WUF5 828 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 TCEANC2Q96MN5 208 aa22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 NOC4LQ9BVI4 516 aaKnown RBP22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 MTIF3Q9H2K0 278 aaKnown RBP22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 NAP1L2Q9ULW6 460 aaPredicted RBP22.9■■□□□ 1.26
SHROOM1-204ENST00000440118 UMODL1Q5DID0 1318 aa22.89■■□□□ 1.26
SHROOM1-204ENST00000440118 SORBS3O60504 671 aa22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 CYP2C9P11712 490 aa22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 DHX32Q7L7V1 743 aaKnown RBP22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 VSIG10LQ86VR7 867 aa22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 SRBD1Q8N5C6 995 aaKnown RBP22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 FANCBQ8NB91 859 aa22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 IL23AQ9NPF7 189 aa22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 TANC1Q9C0D5 1861 aa22.89■■□□□ 1.25
SHROOM1-204ENST00000440118 COL6A3P12111 3177 aa22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 COL9A3Q14050 684 aaPredicted RBP22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 FAM109BQ6ICB4 259 aaPredicted RBP22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 TMTC3Q6ZXV5 915 aa22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 SGMS1Q86VZ5 419 aa22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 ZFP91Q96JP5 570 aaPredicted RBP22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 KATNAL1Q9BW62 490 aa22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 MTMR10Q9NXD2 777 aa22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 DOCK5Q9H7D0 1870 aa22.88■■□□□ 1.25
SHROOM1-204ENST00000440118 GGPS1O95749 300 aa22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 HMGB1P09429 215 aaKnown RBP22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 PTPN11Q06124 597 aaPredicted RBP22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 ZNF365Q70YC5 407 aa22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 HEATR3Q7Z4Q2 680 aa22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 PPTC7Q8NI37 304 aa22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 EMID1Q96A84 441 aaPredicted RBP22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 SPATA33Q96N06 139 aa22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 MLXIPQ9HAP2 919 aa22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 RBM28Q9NW13 759 aaKnown RBP22.87■■□□□ 1.25
SHROOM1-204ENST00000440118 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 hCG_1642624A0A1W2PR95 340 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 ZBTB43O43298 467 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 REC8O95072 547 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 ZNF286BP0CG31 522 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 UBA1P22314 1058 aaKnown RBP22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 RTN1Q16799 776 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 TMEM240Q5SV17 173 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 APOA5Q6Q788 366 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 USP17L6PQ6QN14 398 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 RASEFQ8IZ41 740 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 RPUSD2Q8IZ73 545 aaKnown RBP22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 C7orf31Q8N865 590 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 RETREG2Q8NC44 543 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 WNT8AQ9H1J5 351 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 SCN5AQ14524 2016 aa22.86■■□□□ 1.25
SHROOM1-204ENST00000440118 TRIP12Q14669 1992 aaPredicted RBP22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 NOP56O00567 594 aaKnown RBP22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 STAM2O75886 525 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 PTGISQ16647 500 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 CCDC155Q8N6L0 562 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 SCLYQ96I15 445 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 ALG1Q9BT22 464 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 PSTPIP2Q9H939 334 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 STXBP5LQ9Y2K9 1186 aa22.85■■□□□ 1.25
SHROOM1-204ENST00000440118 FRMPD4Q14CM0 1322 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 KLF18A0A0U1RQI7 1052 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 GOLGA8AA7E2F4 631 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 GOLGA8BA8MQT2 603 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 RGS20O76081 388 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms