RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 BICDL2A1A5D9 508 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 TPM2P07951 284 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 CCNE1P24864 410 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 HOXA13P31271 388 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 CCT6AP40227 531 aaKnown RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 TBC1D10BQ4KMP7 808 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 PRR16Q569H4 304 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 TCP11X2Q5H9J9 407 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 HAUS3Q68CZ6 603 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 CCDC174Q6PII3 467 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 CCAR2Q8N163 923 aaKnown RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 P2RX5Q93086 422 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 GJA10Q969M2 543 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 MAPK8IP1Q9UQF2 711 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 GJA3Q9Y6H8 435 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 ASTN2O75129 1339 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-202ENST00000439724 TRIM49BA6NDI0 452 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 TEX33O43247 280 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
SMAD3-202ENST00000439724 COPB1P53618 953 aaKnown RBP13.17□□□□□ -0.3
SMAD3-202ENST00000439724 PMS1P54277 932 aaKnown RBP13.17□□□□□ -0.3
SMAD3-202ENST00000439724 EHHADHQ08426 723 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 STK4Q13043 487 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 ECM1Q16610 540 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 DCAF15Q66K64 600 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 TC2NQ8N9U0 490 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 KIAA0895Q8NCT3 520 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 TRIM47Q96LD4 638 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
SMAD3-202ENST00000439724 RBBP6Q7Z6E9 1792 aaKnown RBP13.16□□□□□ -0.3
SMAD3-202ENST00000439724 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 COBLO75128 1261 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 CFBP00751 764 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 ICAM1P05362 532 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 FCER1AP12319 257 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 INPP5BP32019 993 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 PSMD2Q13200 908 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 PTPN21Q16825 1174 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 E4F1Q66K89 784 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-202ENST00000439724 FOXR2Q6PJQ5 311 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 NYAP1Q6ZVC0 841 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 IRF2BP1Q8IU81 584 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 APOBEC3FQ8IUX4 373 aaKnown RBP13.16□□□□□ -0.3
SMAD3-202ENST00000439724 TMEM139Q8IV31 216 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 DDX12PQ92771 950 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
SMAD3-202ENST00000439724 DUSP9Q99956 384 aaKnown RBP13.16□□□□□ -0.3
SMAD3-202ENST00000439724 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
SMAD3-202ENST00000439724 USP27XA6NNY8 438 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 N4BP3O15049 544 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 MSH4O15457 936 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 GHRHRQ02643 423 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
SMAD3-202ENST00000439724 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
SMAD3-202ENST00000439724 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-202ENST00000439724 SLF1Q9BQI6 1058 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
SMAD3-202ENST00000439724 ZNF536O15090 1300 aa13.15□□□□□ -0.31
SMAD3-202ENST00000439724 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 POTECB2RU33 542 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 KIF2AO00139 706 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-202ENST00000439724 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 CCP110O43303 1012 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 STX10O60499 249 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 MED24O75448 989 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 TNNT1P13805 278 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 ZNF76P36508 570 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 STAT3P40763 770 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-202ENST00000439724 CENPPQ6IPU0 288 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 TBC1D5Q92609 795 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 UPF1Q92900 1129 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMAD3-202ENST00000439724 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 SRRTQ9BXP5 876 aaKnown RBP13.14□□□□□ -0.31
SMAD3-202ENST00000439724 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-202ENST00000439724 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
SMAD3-202ENST00000439724 CCPG1Q9ULG6 757 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms