RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 CDK7P50613 346 aa23.61■■□□□ 1.37
UBE2F-212ENST00000439338 RUFY3Q7L099 469 aa23.61■■□□□ 1.37
UBE2F-212ENST00000439338 VSIG10LQ86VR7 867 aa23.61■■□□□ 1.37
UBE2F-212ENST00000439338 TRIM43Q96BQ3 446 aaPredicted RBP23.61■■□□□ 1.37
UBE2F-212ENST00000439338 TOX2Q96NM4 488 aa23.61■■□□□ 1.37
UBE2F-212ENST00000439338 LBHD1Q9BQE6 289 aaPredicted RBP23.61■■□□□ 1.37
UBE2F-212ENST00000439338 ZSWIM6Q9HCJ5 1215 aa23.61■■□□□ 1.37
UBE2F-212ENST00000439338 MRVI1Q9Y6F6 885 aa23.61■■□□□ 1.37
UBE2F-212ENST00000439338 MROH7Q68CQ1 1323 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 DCDC2CA8MYV0 355 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 PIK3CDO00329 1044 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 MEIS2O14770 477 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 RGS20O76081 388 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 MYL3P08590 195 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 ADD1P35611 737 aaKnown RBP23.6■■□□□ 1.37
UBE2F-212ENST00000439338 WWC2Q6AWC2 1192 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 ZFP91Q96JP5 570 aaPredicted RBP23.6■■□□□ 1.37
UBE2F-212ENST00000439338 UBE2OQ9C0C9 1292 aaKnown RBP23.6■■□□□ 1.37
UBE2F-212ENST00000439338 POLR3EQ9NVU0 708 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 DDX41Q9UJV9 622 aaKnown RBP23.6■■□□□ 1.37
UBE2F-212ENST00000439338 NID2Q14112 1375 aa23.6■■□□□ 1.37
UBE2F-212ENST00000439338 A0A1W2PPC1 479 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 GH1P01241 217 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 PSMC6P62333 389 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 ARHGAP1Q07960 439 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 FAAP100Q0VG06 881 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 ITGA7Q13683 1181 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 BRDTQ58F21 947 aaPredicted RBP23.59■■□□□ 1.37
UBE2F-212ENST00000439338 PSTPIP2Q9H939 334 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 CYP46A1Q9Y6A2 500 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 V9GY48 417 aaPredicted RBP23.59■■□□□ 1.37
UBE2F-212ENST00000439338 MYH7BA7E2Y1 1941 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 GRIN2DO15399 1336 aa23.59■■□□□ 1.37
UBE2F-212ENST00000439338 A6NJR5 290 aa23.58■■□□□ 1.37
UBE2F-212ENST00000439338 PURAQ00577 322 aaKnown RBP23.58■■□□□ 1.37
UBE2F-212ENST00000439338 UBE2SQ16763 222 aa23.58■■□□□ 1.37
UBE2F-212ENST00000439338 FAM126BQ8IXS8 530 aa23.58■■□□□ 1.37
UBE2F-212ENST00000439338 SLC43A3Q8NBI5 491 aa23.58■■□□□ 1.37
UBE2F-212ENST00000439338 UPF3BQ9BZI7 483 aaKnown RBP23.58■■□□□ 1.37
UBE2F-212ENST00000439338 TM6SF1Q9BZW5 370 aa23.58■■□□□ 1.37
UBE2F-212ENST00000439338 TMEM39AQ9NV64 488 aa23.58■■□□□ 1.37
UBE2F-212ENST00000439338 SCN10AQ9Y5Y9 1956 aa23.58■■□□□ 1.36
UBE2F-212ENST00000439338 CCDC196A0A1B0GTZ2 297 aa23.57■■□□□ 1.36
UBE2F-212ENST00000439338 KIAA0355O15063 1070 aa23.57■■□□□ 1.36
UBE2F-212ENST00000439338 FXR1P51114 621 aaKnown RBP eCLIP23.57■■□□□ 1.36
UBE2F-212ENST00000439338 MRPS9P82933 396 aaKnown RBP23.57■■□□□ 1.36
UBE2F-212ENST00000439338 TOB2Q14106 344 aaPredicted RBP23.57■■□□□ 1.36
UBE2F-212ENST00000439338 AFG1LQ8WV93 481 aa23.57■■□□□ 1.36
UBE2F-212ENST00000439338 BADQ92934 168 aa23.57■■□□□ 1.36
UBE2F-212ENST00000439338 MTG1Q9BT17 334 aaPredicted RBP23.57■■□□□ 1.36
UBE2F-212ENST00000439338 ITGB8P26012 769 aa23.56■■□□□ 1.36
UBE2F-212ENST00000439338 NAPAP54920 295 aa23.56■■□□□ 1.36
UBE2F-212ENST00000439338 TYW1BQ6NUM6 668 aa23.56■■□□□ 1.36
UBE2F-212ENST00000439338 PPP1R18Q6NYC8 613 aa23.56■■□□□ 1.36
UBE2F-212ENST00000439338 TBX21Q9UL17 535 aa23.56■■□□□ 1.36
UBE2F-212ENST00000439338 STXBP3O00186 592 aa23.55■■□□□ 1.36
UBE2F-212ENST00000439338 TLR3O15455 904 aaKnown RBP23.55■■□□□ 1.36
UBE2F-212ENST00000439338 MMP3P08254 477 aa23.55■■□□□ 1.36
UBE2F-212ENST00000439338 RAG1P15918 1043 aa23.55■■□□□ 1.36
UBE2F-212ENST00000439338 EVCP57679 992 aa23.55■■□□□ 1.36
UBE2F-212ENST00000439338 KCNV1Q6PIU1 500 aa23.55■■□□□ 1.36
UBE2F-212ENST00000439338 hCG_1984214I3L0E3 225 aa23.54■■□□□ 1.36
UBE2F-212ENST00000439338 SORBS3O60504 671 aa23.54■■□□□ 1.36
UBE2F-212ENST00000439338 KPNA6O60684 536 aa23.54■■□□□ 1.36
UBE2F-212ENST00000439338 UBA1P22314 1058 aaKnown RBP23.54■■□□□ 1.36
UBE2F-212ENST00000439338 PDIA3P30101 505 aaKnown RBP23.54■■□□□ 1.36
UBE2F-212ENST00000439338 GNPTABQ3T906 1256 aa23.54■■□□□ 1.36
UBE2F-212ENST00000439338 DHX37Q8IY37 1157 aaKnown RBP23.54■■□□□ 1.36
UBE2F-212ENST00000439338 TDHQ8IZJ6 230 aa23.54■■□□□ 1.36
UBE2F-212ENST00000439338 ZNF713Q8N859 430 aaPredicted RBP23.54■■□□□ 1.36
UBE2F-212ENST00000439338 EMID1Q96A84 441 aaPredicted RBP23.54■■□□□ 1.36
UBE2F-212ENST00000439338 SEZ6LQ9BYH1 1024 aa23.54■■□□□ 1.36
UBE2F-212ENST00000439338 BARHL2Q9NY43 387 aa23.54■■□□□ 1.36
UBE2F-212ENST00000439338 STAM2O75886 525 aa23.53■■□□□ 1.36
UBE2F-212ENST00000439338 CD4P01730 458 aa23.53■■□□□ 1.36
UBE2F-212ENST00000439338 CCT2P78371 535 aaKnown RBP23.53■■□□□ 1.36
UBE2F-212ENST00000439338 LAMC2Q13753 1193 aa23.53■■□□□ 1.36
UBE2F-212ENST00000439338 PFKFB3Q16875 520 aaPredicted RBP23.53■■□□□ 1.36
UBE2F-212ENST00000439338 PCNX4Q63HM2 1172 aa23.53■■□□□ 1.36
UBE2F-212ENST00000439338 INPP4AQ96PE3 977 aaPredicted RBP23.53■■□□□ 1.36
UBE2F-212ENST00000439338 LARP6Q9BRS8 491 aaKnown RBP23.53■■□□□ 1.36
UBE2F-212ENST00000439338 PDRG1Q9NUG6 133 aa23.53■■□□□ 1.36
UBE2F-212ENST00000439338 RTEL1Q9NZ71 1219 aa23.53■■□□□ 1.36
UBE2F-212ENST00000439338 DOCK5Q9H7D0 1870 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 SPDYE3A6NKU9 549 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 GGPS1O95749 300 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 ADCY7P51828 1080 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 SP2Q02086 613 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 SEMA3FQ13275 785 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 CELF3Q5SZQ8 465 aaKnown RBP23.52■■□□□ 1.36
UBE2F-212ENST00000439338 PPP1R13LQ8WUF5 828 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 PHKBQ93100 1093 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 NCOA5Q9HCD5 579 aaKnown RBP23.52■■□□□ 1.36
UBE2F-212ENST00000439338 RIC8AQ9NPQ8 531 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 PCDHA6Q9UN73 950 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 PCDHA8Q9Y5H6 950 aa23.52■■□□□ 1.36
UBE2F-212ENST00000439338 B4GALT4O60513 344 aa23.51■■□□□ 1.35
UBE2F-212ENST00000439338 TGFB3P10600 412 aa23.51■■□□□ 1.35
UBE2F-212ENST00000439338 SCG2P13521 617 aa23.51■■□□□ 1.35
UBE2F-212ENST00000439338 ICAM3P32942 547 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms