RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 PODNQ7Z5L7 613 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 CERS5Q8N5B7 392 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 NEDD1Q8NHV4 660 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 RRP36Q96EU6 259 aaKnown RBP18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 EEF2KMTQ96G04 330 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 SEMA6BQ9H3T3 888 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 ESYT2A0FGR8 921 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 RPS6KA5O75582 802 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 TECP42680 631 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 AOC3Q16853 763 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 CAPZA3Q96KX2 299 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 PCMTD1Q96MG8 357 aaPredicted RBP18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 CWC15Q9P013 229 aaKnown RBP18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 UTRNP46939 3433 aa18.24■□□□□ 0.51
CLCNKA-203ENST00000439316 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 ZNF263O14978 683 aa18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 NKRFO15226 690 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 CDK8P49336 464 aa18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 CERS3Q8IU89 383 aa18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 TBCKQ8TEA7 893 aa18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 SECISBP2LQ93073 1101 aaKnown RBP18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 CALML4Q96GE6 196 aa18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 SIK3Q9Y2K2 1263 aa18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 ABCB11O95342 1321 aa18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
CLCNKA-203ENST00000439316 PDE2AO00408 941 aaPredicted RBP18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 ECE2O60344 883 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 IDEP14735 1019 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 CAPN2P17655 700 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 BTDP43251 543 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 CYP27A1Q02318 531 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 KIF5AQ12840 1032 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 GRB10Q13322 594 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 SOGA3Q5TF21 947 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 BLOC1S4Q9NUP1 217 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 STK17AQ9UEE5 414 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 SEC63Q9UGP8 760 aaKnown RBP18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 HPCAL4Q9UM19 191 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 PLAGL2Q9UPG8 496 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 DUSP10Q9Y6W6 482 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 GPR75-ASB3A0A0A6YYF3 556 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 NOVP48745 357 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 VWA3BQ502W6 1294 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 USP17L2Q6R6M4 530 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 LEKR1Q6ZMV7 388 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 UNC13DQ70J99 1090 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 REXO1Q8N1G1 1221 aaKnown RBP18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 HPS3Q969F9 1004 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 CCDC42Q96M95 316 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 MTMR9Q96QG7 549 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 PPP1R1BQ9UD71 204 aaPredicted RBP18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 LRWD1Q9UFC0 647 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 SUGT1Q9Y2Z0 365 aa18.22■□□□□ 0.51
CLCNKA-203ENST00000439316 PVALEFA0A1B0GWK0 134 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 MACROD2A1Z1Q3 448 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 ZNF185O15231 689 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 FXR2P51116 673 aaKnown RBP eCLIP18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 SPA17Q15506 151 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 IQCEQ6IPM2 695 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 COG1Q8WTW3 980 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 FAM163AQ96GL9 167 aaPredicted RBP18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 PNMA5Q96PV4 448 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 SLC39A2Q9NP94 309 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 GAKO14976 1311 aa18.21■□□□□ 0.51
CLCNKA-203ENST00000439316 MYMKA6NI61 221 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 hCG_1984214I3L0E3 225 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 LCA5LO95447 670 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 SYF2O95926 243 aaKnown RBP18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 PLEKP08567 350 aaPredicted RBP18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 TNNT3P45378 269 aaPredicted RBP18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 TGFB2P61812 414 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 ZNF572Q7Z3I7 529 aaPredicted RBP18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 ZNF713Q8N859 430 aaPredicted RBP18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 TRIM58Q8NG06 486 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 PIGSQ96S52 555 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 SH2D4AQ9H788 454 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 ARHGAP20Q9P2F6 1191 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 SNX12Q9UMY4 172 aa18.21■□□□□ 0.5
CLCNKA-203ENST00000439316 EPHB6O15197 1021 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 RNF40O75150 1001 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 PRPF6O94906 941 aaKnown RBP18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 IVLP07476 585 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 MAN2A1Q16706 1144 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 KRT26Q7Z3Y9 468 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 RTKN2Q8IZC4 609 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 GUF1Q8N442 669 aaKnown RBP18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 ZBTB9Q96C00 473 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 TSPYL1Q9H0U9 437 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
CLCNKA-203ENST00000439316 JRKLQ9Y4A0 524 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms