RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 STAM2O75886 525 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 NR3C2P08235 984 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 MYCLP12524 364 aaPredicted RBP23.48■■□□□ 1.35
CHD3-204ENST00000439235 FCGRTP55899 365 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 SETQ01105 290 aaPredicted RBP23.48■■□□□ 1.35
CHD3-204ENST00000439235 MAP2K1Q02750 393 aaPredicted RBP23.48■■□□□ 1.35
CHD3-204ENST00000439235 PTGDRQ13258 359 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 Q4G0T1 1027 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 IL31RAQ8NI17 732 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 SLC37A4O43826 429 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 OR52Z1P0C646 297 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 PTMSP20962 102 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 ME1P48163 572 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 KIF22Q14807 665 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 CALCRLQ16602 461 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 CEP55Q53EZ4 464 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 ARL6IP4Q66PJ3 421 aaKnown RBP23.47■■□□□ 1.35
CHD3-204ENST00000439235 NIPA1Q7RTP0 329 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
CHD3-204ENST00000439235 MYH7BA7E2Y1 1941 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 FAM86B1E9PN63 330 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 ASTN1O14525 1302 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 FAM86B2P0C5J1 330 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 PRPHP41219 470 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 LACTBP83111 547 aaPredicted RBP23.46■■□□□ 1.35
CHD3-204ENST00000439235 SP3Q02447 781 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 ZNF792Q3KQV3 632 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 PRR16Q569H4 304 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 DPP9Q86TI2 863 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 VSIG10LQ86VR7 867 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 FERMT2Q96AC1 680 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 MXRA8Q9BRK3 442 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 DIS3Q9Y2L1 958 aaKnown RBP23.46■■□□□ 1.35
CHD3-204ENST00000439235 UBIAD1Q9Y5Z9 338 aa23.46■■□□□ 1.35
CHD3-204ENST00000439235 LCTP09848 1927 aa23.45■■□□□ 1.35
CHD3-204ENST00000439235 ASB14A6NK59 587 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 TBX3O15119 743 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 MARCH6O60337 910 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 PRPF40AO75400 957 aaKnown RBP23.45■■□□□ 1.34
CHD3-204ENST00000439235 EDNRBP24530 442 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 MARCKSP29966 332 aaPredicted RBP23.45■■□□□ 1.34
CHD3-204ENST00000439235 PDE4DQ08499 809 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 MAP2K5Q13163 448 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 STXBP2Q15833 593 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 MORN1Q5T089 497 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 ZNF467Q7Z7K2 595 aaPredicted RBP23.45■■□□□ 1.34
CHD3-204ENST00000439235 NLRX1Q86UT6 975 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 PLA2G4DQ86XP0 818 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 C4orf32Q8N8J7 132 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 KRI1Q8N9T8 703 aaKnown RBP23.45■■□□□ 1.34
CHD3-204ENST00000439235 FGD4Q96M96 766 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 NUDT12Q9BQG2 462 aa23.45■■□□□ 1.34
CHD3-204ENST00000439235 IGLV3-22A0A075B6J6 115 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 GOLGA6L4A6NEF3 574 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 MEIS1O00470 390 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 CUTAO60888 179 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 COBLO75128 1261 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 MRPS9P82933 396 aaKnown RBP23.44■■□□□ 1.34
CHD3-204ENST00000439235 SLFN12Q8IYM2 578 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 LENG9Q96B70 501 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 TMEM60Q9H2L4 133 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 JADE2Q9NQC1 790 aa23.44■■□□□ 1.34
CHD3-204ENST00000439235 RGS2P41220 211 aa23.43■■□□□ 1.34
CHD3-204ENST00000439235 PSMC4P43686 418 aa23.43■■□□□ 1.34
CHD3-204ENST00000439235 GNPTABQ3T906 1256 aa23.43■■□□□ 1.34
CHD3-204ENST00000439235 GPRASP2Q96D09 838 aa23.43■■□□□ 1.34
CHD3-204ENST00000439235 INPP4AQ96PE3 977 aaPredicted RBP23.43■■□□□ 1.34
CHD3-204ENST00000439235 MTMR9Q96QG7 549 aa23.43■■□□□ 1.34
CHD3-204ENST00000439235 KCNMB3Q9NPA1 279 aa23.43■■□□□ 1.34
CHD3-204ENST00000439235 FBXO2Q9UK22 296 aaPredicted RBP23.43■■□□□ 1.34
CHD3-204ENST00000439235 PCDHA7Q9UN72 937 aa23.43■■□□□ 1.34
CHD3-204ENST00000439235 SRPRBQ9Y5M8 271 aaKnown RBP23.43■■□□□ 1.34
CHD3-204ENST00000439235 GPR25O00155 361 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 EIF3JO75822 258 aaKnown RBP23.42■■□□□ 1.34
CHD3-204ENST00000439235 ECM2O94769 699 aaPredicted RBP23.42■■□□□ 1.34
CHD3-204ENST00000439235 HOXC6P09630 235 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 ITGB5P18084 799 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 MTMR1Q13613 665 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 TMEM266Q2M3C6 531 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 DTHD1Q6ZMT9 781 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 MORC4Q8TE76 937 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 CDHR1Q96JP9 859 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 FAM20AQ96MK3 541 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 LMBRD1Q9NUN5 540 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 MRVI1Q9Y6F6 885 aa23.42■■□□□ 1.34
CHD3-204ENST00000439235 UBE2HP62256 183 aa23.41■■□□□ 1.34
CHD3-204ENST00000439235 NFKBIBQ15653 356 aa23.41■■□□□ 1.34
CHD3-204ENST00000439235 MSL3Q8N5Y2 521 aaKnown RBP23.41■■□□□ 1.34
CHD3-204ENST00000439235 CYP2W1Q8TAV3 490 aa23.41■■□□□ 1.34
CHD3-204ENST00000439235 ETNPPLQ8TBG4 499 aa23.41■■□□□ 1.34
CHD3-204ENST00000439235 USP6NLQ92738 828 aa23.41■■□□□ 1.34
CHD3-204ENST00000439235 MAML3Q96JK9 1138 aa23.41■■□□□ 1.34
CHD3-204ENST00000439235 ZFP91Q96JP5 570 aaPredicted RBP23.41■■□□□ 1.34
CHD3-204ENST00000439235 APBA2Q99767 749 aa23.41■■□□□ 1.34
CHD3-204ENST00000439235 MSH4O15457 936 aa23.4■■□□□ 1.34
CHD3-204ENST00000439235 MAFGO15525 162 aa23.4■■□□□ 1.34
CHD3-204ENST00000439235 ADALQ6DHV7 355 aa23.4■■□□□ 1.34
CHD3-204ENST00000439235 ZNF579Q8NAF0 562 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms