RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 GDAP1L1Q96MZ0 367 aa13.53□□□□□ -0.24
TCOF1-205ENST00000439160 POLD4Q9HCU8 107 aa13.53□□□□□ -0.24
TCOF1-205ENST00000439160 BARHL2Q9NY43 387 aa13.53□□□□□ -0.24
TCOF1-205ENST00000439160 SEPT9Q9UHD8 586 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-205ENST00000439160 IGBP1P78318 339 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 TUBB2AQ13885 445 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 QRICH1Q2TAL8 776 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 DCUN1D2Q6PH85 259 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 CCDC91Q7Z6B0 441 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 KIAA1524Q8TCG1 905 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 ATRIPQ8WXE1 791 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 NACC1Q96RE7 527 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 TUBB2BQ9BVA1 445 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 LIN9Q5TKA1 542 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 HDXQ7Z353 690 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.24
TCOF1-205ENST00000439160 POMGNT1Q8WZA1 660 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 KCNG1Q9UIX4 513 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 FLT1P17948 1338 aa13.52□□□□□ -0.24
TCOF1-205ENST00000439160 FOXN1O15353 648 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 MYL1P05976 194 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 PAIP2Q9BPZ3 127 aaKnown RBP13.52□□□□□ -0.25
TCOF1-205ENST00000439160 CCDC77Q9BR77 488 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 HAUS4Q9H6D7 363 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 MTRF1LQ9UGC7 380 aaKnown RBP13.52□□□□□ -0.25
TCOF1-205ENST00000439160 RWDD2AQ9UIY3 292 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 PCDHA6Q9UN73 950 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 PCDHA8Q9Y5H6 950 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 MYO3BQ8WXR4 1341 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 ATP2A1O14983 1001 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 CDC25BP30305 580 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 ADGRF4Q8IZF3 695 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
TCOF1-205ENST00000439160 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 CAPN2P17655 700 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 UBL4BQ8N7F7 174 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
TCOF1-205ENST00000439160 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-205ENST00000439160 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-205ENST00000439160 FDPSP14324 419 aaKnown RBP13.51□□□□□ -0.25
TCOF1-205ENST00000439160 RCSD1Q6JBY9 416 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 PIGOQ8TEQ8 1089 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 UBLCP1Q8WVY7 318 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-205ENST00000439160 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 ZEB2O60315 1214 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 SPP2Q13103 211 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 ZBTB8OSQ8IWT0 167 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 PCIF1Q9H4Z3 704 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 AGTPBP1Q9UPW5 1226 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-205ENST00000439160 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 DAAM2Q86T65 1068 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 VSTM4Q8IW00 320 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 TRIM58Q8NG06 486 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 PPP1R13BQ96KQ4 1090 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 ZHX2Q9Y6X8 837 aa13.51□□□□□ -0.25
TCOF1-205ENST00000439160 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 TDP2O95551 362 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 CASP7P55210 303 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 MKRN3Q13064 507 aaKnown RBP13.5□□□□□ -0.25
TCOF1-205ENST00000439160 MAN2A1Q16706 1144 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 SLC7A3Q8WY07 619 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 ATP2C2O75185 946 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 ARHGAP4P98171 946 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 FAM186BQ8IYM0 893 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 DDX12PQ92771 950 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 OSBPL5Q9H0X9 879 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-205ENST00000439160 TRIM49BA6NDI0 452 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 MAP3K9P80192 1104 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 NRBP2Q9NSY0 501 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
TCOF1-205ENST00000439160 PRPF6O94906 941 aaKnown RBP13.49□□□□□ -0.25
TCOF1-205ENST00000439160 KRT31Q15323 416 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 SBK1Q52WX2 424 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 HINFPQ9BQA5 517 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 RAVER2Q9HCJ3 691 aaKnown RBP13.49□□□□□ -0.25
TCOF1-205ENST00000439160 ENC1O14682 589 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 H2AFZP0C0S5 128 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 PPARDQ03181 441 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 AP3B2Q13367 1082 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 FAM47CQ5HY64 1035 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 H2AFVQ71UI9 128 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 ST7Q9NRC1 585 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 C1orf112Q9NSG2 853 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 COL5A2P05997 1499 aaPredicted RBP13.49□□□□□ -0.25
TCOF1-205ENST00000439160 RASSF7Q02833 373 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 DPP9Q86TI2 863 aa13.49□□□□□ -0.25
TCOF1-205ENST00000439160 SELENOSQ9BQE4 189 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms