RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 AFG1LQ8WV93 481 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 STAG1Q8WVM7 1258 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 MKL1Q969V6 931 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
SMPD4-208ENST00000439029 BOLA2Q9H3K6 86 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 MTMR4Q9NYA4 1195 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 HDAC6Q9UBN7 1215 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 ATG2AQ2TAZ0 1938 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 MED19A0JLT2 244 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-208ENST00000439029 NFIBO00712 420 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 TTLL1O95922 423 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-208ENST00000439029 CTNNB1P35222 781 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 SLC1A4P43007 532 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 PDE4DQ08499 809 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 FAM160B2Q86V87 743 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-208ENST00000439029 ZNF444Q8N0Y2 327 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-208ENST00000439029 CHURC1Q8WUH1 139 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 KAT2BQ92831 832 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 RPGRIP1Q96KN7 1286 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 SAMD11Q96NU1 681 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 PAG1Q9NWQ8 432 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 ARPP21Q9UBL0 812 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-208ENST00000439029 ADD3Q9UEY8 706 aaKnown RBP11.59□□□□□ -0.55
SMPD4-208ENST00000439029 PRR12Q9ULL5 1215 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 GVINP1Q7Z2Y8 2422 aa11.59□□□□□ -0.55
SMPD4-208ENST00000439029 NLRC5Q86WI3 1866 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 IPO8O15397 1037 aaKnown RBP11.58□□□□□ -0.56
SMPD4-208ENST00000439029 MMP3P08254 477 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 FDX1P10109 184 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 NDUFV1P49821 464 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 SIGLEC14Q08ET2 396 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 TRIM71Q2Q1W2 868 aaKnown RBP11.58□□□□□ -0.56
SMPD4-208ENST00000439029 C7orf31Q8N865 590 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 OSBPL7Q9BZF2 842 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 GTF2IRD1Q9UHL9 959 aa11.58□□□□□ -0.56
SMPD4-208ENST00000439029 TPRP12270 2363 aaKnown RBP11.58□□□□□ -0.56
SMPD4-208ENST00000439029 PROB1E7EW31 1015 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 NKRFO15226 690 aaKnown RBP eCLIP11.57□□□□□ -0.568e-7■■□□□ 14.5
SMPD4-208ENST00000439029 NCK2O43639 380 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 PARNO95453 639 aaKnown RBP11.57□□□□□ -0.56
SMPD4-208ENST00000439029 RBL2Q08999 1139 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 HIC1Q14526 733 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 FRMD5Q7Z6J6 570 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 ADSSL1Q8N142 457 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 RHPN1Q8TCX5 695 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.57□□□□□ -0.563e-6■■■□□ 15.6
SMPD4-208ENST00000439029 IRF2BPLQ9H1B7 796 aa11.57□□□□□ -0.56
SMPD4-208ENST00000439029 GSG1L2A8MUP6 293 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 LOC730098B7Z3J9 87 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 IFIT2P09913 472 aaKnown RBP11.56□□□□□ -0.56
SMPD4-208ENST00000439029 ZNF286BP0CG31 522 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 SLC16A2P36021 539 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 THPOP40225 353 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 PSEN2P49810 448 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 RRP1P56182 461 aaKnown RBP11.56□□□□□ -0.56
SMPD4-208ENST00000439029 ADAM15Q13444 863 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 LY6KQ17RY6 165 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 SBK1Q52WX2 424 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 TTBK2Q6IQ55 1244 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 SEPT14Q6ZU15 432 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 SESTD1Q86VW0 696 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 ERC1Q8IUD2 1116 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 TOP1MTQ969P6 601 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 IFIH1Q9BYX4 1025 aaKnown RBP11.56□□□□□ -0.56
SMPD4-208ENST00000439029 MYO15AQ9UKN7 3530 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 NCOR2Q9Y618 2525 aa11.56□□□□□ -0.56
SMPD4-208ENST00000439029 EP300Q09472 2414 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-208ENST00000439029 DCHS1Q96JQ0 3298 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-208ENST00000439029 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-208ENST00000439029 SORBS3O60504 671 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 ICAM1P05362 532 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 TSPY3P0CV98 308 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 TSPY8P0CW00 308 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 PTK7Q13308 1070 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 UBE3CQ15386 1083 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 CCDC96Q2M329 555 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 RCSD1Q6JBY9 416 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 ADGRD2Q7Z7M1 963 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 FIBCD1Q8N539 461 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 GMCL1Q96IK5 515 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 MSLNLQ96KJ4 702 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 STRBPQ96SI9 672 aaKnown RBP11.55□□□□□ -0.56
SMPD4-208ENST00000439029 CLEC1BQ9P126 229 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 BARX2Q9UMQ3 279 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-208ENST00000439029 USP15Q9Y4E8 981 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-208ENST00000439029 EPG5Q9HCE0 2579 aa11.55□□□□□ -0.56
SMPD4-208ENST00000439029 GH1P01241 217 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 CTSHP09668 335 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 SP100P23497 879 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 BMPR1AP36894 532 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 TDO2P48775 406 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms