RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ADD3Q9UEY8 706 aaKnown RBP13.29□□□□□ -0.28
CSTF3-203ENST00000438862 MUTYHQ9UIF7 546 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 MYH4Q9Y623 1939 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
CSTF3-203ENST00000438862 A6NJR5 290 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 GOLIM4O00461 696 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 BMP3P12645 472 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 ALAS1P13196 640 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 RASA1P20936 1047 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 ADD2P35612 726 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 STAT2P52630 851 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 TRIM67Q6ZTA4 783 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 ERMP1Q7Z2K6 904 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 FAM160B2Q86V87 743 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 GMCL1P1Q8NEA9 526 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 C17orf80Q9BSJ5 609 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 ARPP21Q9UBL0 812 aaPredicted RBP13.28□□□□□ -0.28
CSTF3-203ENST00000438862 SLC4A4Q9Y6R1 1079 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 DDX49Q9Y6V7 483 aaKnown RBP13.28□□□□□ -0.28
CSTF3-203ENST00000438862 TECTAO75443 2155 aa13.28□□□□□ -0.28
CSTF3-203ENST00000438862 TMEM221A6NGB7 291 aa13.27□□□□□ -0.29
CSTF3-203ENST00000438862 TMEM232C9JQI7 657 aa13.27□□□□□ -0.29
CSTF3-203ENST00000438862 H3BNC9 293 aa13.27□□□□□ -0.29
CSTF3-203ENST00000438862 M0R296 226 aa13.27□□□□□ -0.29
CSTF3-203ENST00000438862 RBL2Q08999 1139 aa13.27□□□□□ -0.29
CSTF3-203ENST00000438862 TCEAL5Q5H9L2 206 aa13.27□□□□□ -0.29
CSTF3-203ENST00000438862 LRRC47Q8N1G4 583 aaKnown RBP13.27□□□□□ -0.29
CSTF3-203ENST00000438862 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.27□□□□□ -0.29
CSTF3-203ENST00000438862 NSUN3Q9H649 340 aaKnown RBP13.27□□□□□ -0.29
CSTF3-203ENST00000438862 CLDND1Q9NY35 253 aa13.27□□□□□ -0.29
CSTF3-203ENST00000438862 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 TTLL1O95922 423 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 FOSBP53539 338 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 HTRA4P83105 476 aaPredicted RBP13.26□□□□□ -0.29
CSTF3-203ENST00000438862 GPM6BQ13491 265 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 SBK1Q52WX2 424 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 SLFN13Q68D06 897 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 FAM117BQ6P1L5 589 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 SESTD1Q86VW0 696 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 FBXL6Q8N531 539 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 STAG1Q8WVM7 1258 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 DNAJC2Q99543 621 aaKnown RBP13.26□□□□□ -0.29
CSTF3-203ENST00000438862 ZNF287Q9HBT7 754 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 MTMR4Q9NYA4 1195 aa13.26□□□□□ -0.29
CSTF3-203ENST00000438862 ZFHX2Q9C0A1 2572 aaPredicted RBP13.26□□□□□ -0.29
CSTF3-203ENST00000438862 MBTPS2O43462 519 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 PLA2G6O60733 806 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 NBNO60934 754 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 LTBRP36941 435 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 UBE3CQ15386 1083 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 NSMFQ6X4W1 530 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
CSTF3-203ENST00000438862 PPP1R13LQ8WUF5 828 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
CSTF3-203ENST00000438862 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 SPTBN4Q9H254 2564 aa13.25□□□□□ -0.29
CSTF3-203ENST00000438862 AMHP03971 560 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 CKBP12277 381 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 ALDH5A1P51649 535 aaPredicted RBP13.24□□□□□ -0.29
CSTF3-203ENST00000438862 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
CSTF3-203ENST00000438862 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 CTC1Q2NKJ3 1217 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 RPAINQ86UA6 219 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 SCFD2Q8WU76 684 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 FRAT1Q92837 279 aaPredicted RBP13.24□□□□□ -0.29
CSTF3-203ENST00000438862 CEP95Q96GE4 821 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 MPHOSPH6Q99547 160 aaKnown RBP13.24□□□□□ -0.29
CSTF3-203ENST00000438862 SLC4A5Q9BY07 1137 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 PAG1Q9NWQ8 432 aa13.24□□□□□ -0.29
CSTF3-203ENST00000438862 BHMG1C9JSJ3 638 aaPredicted RBP13.23□□□□□ -0.29
CSTF3-203ENST00000438862 PROB1E7EW31 1015 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 STXBP3O00186 592 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 CENPBP07199 599 aaPredicted RBP13.23□□□□□ -0.29
CSTF3-203ENST00000438862 ZXDAP98168 799 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 SMAD4Q13485 552 aaKnown RBP13.23□□□□□ -0.29
CSTF3-203ENST00000438862 BAATQ14032 418 aaPredicted RBP13.23□□□□□ -0.29
CSTF3-203ENST00000438862 TCTN1Q2MV58 587 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 SLFNL1Q499Z3 407 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 GDF6Q6KF10 455 aaPredicted RBP13.23□□□□□ -0.29
CSTF3-203ENST00000438862 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 GIMAP6Q6P9H5 292 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 TMEM192Q8IY95 271 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
CSTF3-203ENST00000438862 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 FAM86C1Q9NVL1 165 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 ISY1Q9ULR0 285 aaKnown RBP13.23□□□□□ -0.29
CSTF3-203ENST00000438862 TNNQ9UQP3 1299 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 C5orf42Q9H799 3197 aa13.23□□□□□ -0.29
CSTF3-203ENST00000438862 PTPRZ1P23471 2315 aaPredicted RBP13.22□□□□□ -0.29
CSTF3-203ENST00000438862 LCTP09848 1927 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 LGR5O75473 907 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 SLC1A4P43007 532 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 CHMP4BP1P59074 171 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms