RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PLEKHO2Q8TD55 490 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 ZBTB8AQ96BR9 441 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 MRRFQ96E11 262 aaKnown RBP4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 DDX11Q96FC9 970 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 BORCS6Q96GS4 357 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 MMP19Q99542 508 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 MARCH2Q9P0N8 246 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 DUSP10Q9Y6W6 482 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 NOP56O00567 594 aaKnown RBP4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 SMARCA5O60264 1052 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 THBDP07204 575 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 CYP2C8P10632 490 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 NAT2P11245 290 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 ZNF143P52747 638 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 GJA9P57773 515 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 SMAD4Q13485 552 aaKnown RBP4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 LINC00482Q8N8I6 264 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 DDX1Q92499 740 aaKnown RBP4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 DPF3Q92784 378 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 LNPKQ9C0E8 428 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 CNOT11Q9UKZ1 510 aaKnown RBP4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 STRIP2Q9ULQ0 834 aa4.89□□□□□ -1.63
HMGB1P18-201ENST00000438801 KIF21BO75037 1637 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 LRP5O75197 1615 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 K7ESM1 405 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 SGSM2O43147 1006 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 C8BP07358 591 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 CNR2P34972 360 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 NCAPHQ15003 741 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 INF2Q27J81 1249 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 GTF2IRD2BQ6EKJ0 949 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 ETV3LQ6ZN32 361 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 GTF2IRD2Q86UP8 949 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 ZNF761Q86XN6 746 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 TEX2Q8IWB9 1127 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 TRIM59Q8IWR1 403 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 PPP1R14AQ96A00 147 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 ANAPC16Q96DE5 110 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 TGIF2Q9GZN2 237 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 AP5M1Q9H0R1 490 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 ACBD3Q9H3P7 528 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 CYP26B1Q9NR63 512 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 BTG4Q9NY30 223 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 INPP5FQ9Y2H2 1132 aa4.88□□□□□ -1.63
HMGB1P18-201ENST00000438801 EIF4G3O43432 1585 aaKnown RBP4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 C22orf46C9J442 243 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 IQCEQ6IPM2 695 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 HHIPL2Q6UWX4 724 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 MIB1Q86YT6 1006 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 ADAMTS17Q8TE56 1095 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 FRS2Q8WU20 508 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 MRGPRX3Q96LB0 322 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 SYT3Q9BQG1 590 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 GORASP1Q9BQQ3 440 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 C11orf84Q9BUA3 381 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 LGR4Q9BXB1 951 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 NKX2-4Q9H2Z4 354 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 PCDH18Q9HCL0 1135 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 CACNA1AO00555 2505 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 SYNJ1O43426 1573 aa4.87□□□□□ -1.63
HMGB1P18-201ENST00000438801 CYP4F3Q08477 520 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 ZNF827Q17R98 1081 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 ZXDCQ2QGD7 858 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 CD300LDQ6UXZ3 194 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 FAM26EQ8N5C1 309 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 KYQ8NBH2 561 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 NPLOC4Q8TAT6 608 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 SEC14L1Q92503 715 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 YEATS2Q9ULM3 1422 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 CFAP43Q8NDM7 1665 aa4.86□□□□□ -1.63
HMGB1P18-201ENST00000438801 ATF4P18848 351 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 FPR2P25090 351 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 RPL13P26373 211 aaKnown RBP4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 THBS2P35442 1172 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 SLC6A11P48066 632 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 RPL11P62913 178 aaKnown RBP4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 MROH9Q5TGP6 573 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 E4F1Q66K89 784 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 ZC3H18Q86VM9 953 aaKnown RBP4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 RIOX2Q8IUF8 465 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 TTLL6Q8N841 843 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 BTN2A2Q8WVV5 523 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 GPR20Q99678 358 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 CCSER2Q9H7U1 834 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 KIAA1522Q9P206 1035 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 PALD1Q9ULE6 856 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 TIMM13Q9Y5L4 95 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 ADAMTSL3P82987 1691 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 STRCQ7RTU9 1775 aa4.85□□□□□ -1.63
HMGB1P18-201ENST00000438801 SMARCA4P51532 1647 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 TBX1O43435 398 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 ITGB3P05106 788 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 INSRRP14616 1297 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 MAGEA10P43363 369 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 GTF2A2P52657 109 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 RGL3Q3MIN7 710 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 C6orf15Q6UXA7 325 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 CEP68Q76N32 757 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 MILR1Q7Z6M3 343 aa4.84□□□□□ -1.63
HMGB1P18-201ENST00000438801 STK32CQ86UX6 486 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms