RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PSMD14O00487 310 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 NOP56O00567 594 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 TDP2O95551 362 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 HARSP12081 509 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 CLCN6P51797 869 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 RSBN1LQ6PCB5 846 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 SMCR8Q8TEV9 937 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 IFT74Q96LB3 600 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 PLEKHA4Q9H4M7 779 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 IVNS1ABPQ9Y6Y0 642 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 SORBS3O60504 671 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 P2RX5Q93086 422 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 DHTKD1Q96HY7 919 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 LARSQ9P2J5 1176 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 ABT1Q9ULW3 272 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 ENTPD3O75355 529 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 NDUFB10O96000 172 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 MNAT1P51948 309 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 ARHGAP4P98171 946 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 AP3B2Q13367 1082 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 SCAF8Q9UPN6 1271 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 CDR1P51861 262 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 RASA3Q14644 834 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 GRIK5Q16478 980 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 CNOT6LQ96LI5 555 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■■■ 37.3
TRAPPC9-202ENST00000438773 SALL1Q9NSC2 1324 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 SEC31AO94979 1220 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 SPP2Q13103 211 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 PARP4Q9UKK3 1724 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-202ENST00000438773 GRIN1Q05586 938 aa12.77□□□□□ -0.36
TRAPPC9-202ENST00000438773 MAP9Q49MG5 647 aa12.77□□□□□ -0.36
TRAPPC9-202ENST00000438773 XKR9Q5GH70 373 aa12.77□□□□□ -0.36
TRAPPC9-202ENST00000438773 GJA10Q969M2 543 aa12.77□□□□□ -0.36
TRAPPC9-202ENST00000438773 WRNIP1Q96S55 665 aa12.77□□□□□ -0.36
TRAPPC9-202ENST00000438773 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.36
TRAPPC9-202ENST00000438773 IMPG2Q9BZV3 1241 aa12.77□□□□□ -0.36
TRAPPC9-202ENST00000438773 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 TM4SF1P30408 202 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 CETN2P41208 172 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 CYP2J2P51589 502 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 ADAM9Q13443 819 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 PRMT6Q96LA8 375 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 NBPF3Q9H094 633 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 STXBP3O00186 592 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 PLA2G4BP0C869 781 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 CASP14P31944 242 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 HDLBPQ00341 1268 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 HLTFQ14527 1009 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 SLC9C1Q4G0N8 1177 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 CCDC51Q96ER9 411 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 NYAP2Q9P242 653 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 ZNF70Q9UC06 446 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 RWDD2AQ9UIY3 292 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 FAM205AQ6ZU69 1335 aa12.77□□□□□ -0.37
TRAPPC9-202ENST00000438773 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 FANCGO15287 622 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 CCNE1P24864 410 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 PPP2R3AQ06190 1150 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 ODR4Q5SWX8 454 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 NCAPG2Q86XI2 1143 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 DPF2Q92785 391 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 FNBP1Q96RU3 617 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 TMEM51Q9NW97 253 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 CKAP4Q07065 602 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 FHOD1Q9Y613 1164 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 GNA14O95837 355 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 MAGEA1P43355 309 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 BIRC3Q13489 604 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 MAD2L2Q9UI95 211 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 EXOC7Q9UPT5 735 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 ZHX2Q9Y6X8 837 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 ROBO1Q9Y6N7 1651 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 MICALL1Q8N3F8 863 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 CEP112Q8N8E3 955 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 FAM151AQ8WW52 585 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms