RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ARIH2O95376 493 aa28.48■■■□□ 2.15
RAPGEF1-206ENST00000438647 KCNV1Q6PIU1 500 aa28.48■■■□□ 2.15
RAPGEF1-206ENST00000438647 PSTPIP2Q9H939 334 aa28.48■■■□□ 2.15
RAPGEF1-206ENST00000438647 FRMPD4Q14CM0 1322 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 hCG_1984214I3L0E3 225 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 KPNA6O60684 536 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 GH1P01241 217 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 CDK7P50613 346 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 FUT2Q10981 343 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 ZNF713Q8N859 430 aaPredicted RBP28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 COPS5Q92905 334 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 TRIOBPQ9H2D6 2365 aa28.47■■■□□ 2.15
RAPGEF1-206ENST00000438647 KIAA1217Q5T5P2 1943 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 A6NJR5 290 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 MEIS2O14770 477 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 STAM2O75886 525 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 CDC27P30260 824 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 MDM2Q00987 491 aaPredicted RBP28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 LY6KQ17RY6 165 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 USP17L6PQ6QN14 398 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 TEX2Q8IWB9 1127 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 UBE2OQ9C0C9 1292 aaKnown RBP28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 FAM217BQ9NTX9 383 aaPredicted RBP28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 TMEM39AQ9NV64 488 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 DDX41Q9UJV9 622 aaKnown RBP28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 NID2Q14112 1375 aa28.46■■■□□ 2.15
RAPGEF1-206ENST00000438647 TLR3O15455 904 aaKnown RBP28.45■■■□□ 2.14
RAPGEF1-206ENST00000438647 ITGA7Q13683 1181 aa28.45■■■□□ 2.14
RAPGEF1-206ENST00000438647 PPP1R18Q6NYC8 613 aa28.45■■■□□ 2.14
RAPGEF1-206ENST00000438647 IL31RAQ8NI17 732 aa28.45■■■□□ 2.14
RAPGEF1-206ENST00000438647 V9GY48 417 aaPredicted RBP28.45■■■□□ 2.14
RAPGEF1-206ENST00000438647 MYL3P08590 195 aa28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 TGFB3P10600 412 aa28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 ADD1P35611 737 aaKnown RBP28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 PURAQ00577 322 aaKnown RBP28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 FAAP100Q0VG06 881 aa28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 GNPTABQ3T906 1256 aa28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 XRRA1Q6P2D8 792 aa28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 SLC43A3Q8NBI5 491 aa28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 GPKOWQ92917 476 aaPredicted RBP eCLIP28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 MTG1Q9BT17 334 aaPredicted RBP28.44■■■□□ 2.14
RAPGEF1-206ENST00000438647 TRIM43BA6NCK2 446 aa28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 KIAA0355O15063 1070 aa28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 NAPAP54920 295 aa28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 EVCP57679 992 aa28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 WWC2Q6AWC2 1192 aa28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 SH3RF1Q7Z6J0 888 aa28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 EMID1Q96A84 441 aaPredicted RBP28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 TRIM43Q96BQ3 446 aaPredicted RBP28.43■■■□□ 2.14
RAPGEF1-206ENST00000438647 RGS20O76081 388 aa28.42■■■□□ 2.14
RAPGEF1-206ENST00000438647 RAG1P15918 1043 aa28.42■■■□□ 2.14
RAPGEF1-206ENST00000438647 ANAPC15P60006 121 aa28.42■■■□□ 2.14
RAPGEF1-206ENST00000438647 ARHGAP1Q07960 439 aa28.42■■■□□ 2.14
RAPGEF1-206ENST00000438647 LAMC2Q13753 1193 aa28.42■■■□□ 2.14
RAPGEF1-206ENST00000438647 FAM126BQ8IXS8 530 aa28.42■■■□□ 2.14
RAPGEF1-206ENST00000438647 SPDYE3A6NKU9 549 aa28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 PCNX4Q63HM2 1172 aa28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 TDHQ8IZJ6 230 aa28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 AFG1LQ8WV93 481 aa28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 UPF3BQ9BZI7 483 aaKnown RBP28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 GLT8D2Q9H1C3 349 aa28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 EHMT1Q9H9B1 1298 aa28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 BARHL2Q9NY43 387 aa28.41■■■□□ 2.14
RAPGEF1-206ENST00000438647 DHX37Q8IY37 1157 aaKnown RBP28.4■■■□□ 2.14
RAPGEF1-206ENST00000438647 INPP4AQ96PE3 977 aaPredicted RBP28.4■■■□□ 2.14
RAPGEF1-206ENST00000438647 GRIN2DO15399 1336 aa28.4■■■□□ 2.14
RAPGEF1-206ENST00000438647 MMP3P08254 477 aa28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 PDIA3P30101 505 aaKnown RBP28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 PSMC6P62333 389 aa28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 MRPS9P82933 396 aaKnown RBP28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 AKAP17AQ02040 695 aaKnown RBP28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 TOB2Q14106 344 aaPredicted RBP28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 BADQ92934 168 aa28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 RIC8AQ9NPQ8 531 aa28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 PCDH10Q9P2E7 1040 aa28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 TBX21Q9UL17 535 aa28.39■■■□□ 2.14
RAPGEF1-206ENST00000438647 LTBP2Q14767 1821 aa28.39■■■□□ 2.13
RAPGEF1-206ENST00000438647 STXBP3O00186 592 aa28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 CD4P01730 458 aa28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 FXR1P51114 621 aaKnown RBP eCLIP28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 DGKDQ16760 1214 aa28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 UBE2SQ16763 222 aa28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 PFKFB3Q16875 520 aaPredicted RBP28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 PPTC7Q8NI37 304 aa28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 PDRG1Q9NUG6 133 aa28.38■■■□□ 2.13
RAPGEF1-206ENST00000438647 FIBPO43427 364 aa28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 SCG2P13521 617 aa28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 ICAM3P32942 547 aa28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 ADCY7P51828 1080 aa28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 CELF3Q5SZQ8 465 aaKnown RBP28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 TYW1BQ6NUM6 668 aa28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 NLRX1Q86UT6 975 aa28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 CCDC12Q8WUD4 166 aaPredicted RBP28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 ZNF274Q96GC6 653 aaPredicted RBP28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 ZFP91Q96JP5 570 aaPredicted RBP28.37■■■□□ 2.13
RAPGEF1-206ENST00000438647 PRPF3O43395 683 aaKnown RBP28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 GGPS1O95749 300 aa28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 TIMP1P01033 207 aa28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 FOSP01100 380 aaPredicted RBP28.36■■■□□ 2.13
RAPGEF1-206ENST00000438647 UBA1P22314 1058 aaKnown RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms