RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 HAUS3Q68CZ6 603 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 DNAAF5Q86Y56 855 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 EHMT1Q9H9B1 1298 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 PIGOQ8TEQ8 1089 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 MAD2L2Q9UI95 211 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 POTEB3A0JP26 581 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 POTECB2RU33 542 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 STK4Q13043 487 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 POTEBQ6S5H4 581 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 MGARPQ8TDB4 240 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 INTS13Q9NVM9 706 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 SEMA3EO15041 775 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 LRRN2O75325 713 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 TTLL1O95922 423 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 CETN1Q12798 172 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 SCLT1Q96NL6 688 aa12.84□□□□□ -0.35
PDLIM5-206ENST00000437932 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.35
PDLIM5-206ENST00000437932 ABL1P00519 1130 aa12.83□□□□□ -0.35
PDLIM5-206ENST00000437932 XRCC5P13010 732 aaKnown RBP12.83□□□□□ -0.35
PDLIM5-206ENST00000437932 CERS3Q8IU89 383 aa12.83□□□□□ -0.35
PDLIM5-206ENST00000437932 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.35
PDLIM5-206ENST00000437932 FAM71BQ8TC56 605 aa12.83□□□□□ -0.35
PDLIM5-206ENST00000437932 PALMO75781 387 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 WDR78Q5VTH9 848 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 OTUD6BQ8N6M0 293 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 NFU1Q9UMS0 254 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 EXOC3O60645 756 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 ATP2B4P23634 1241 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 TEKT1Q969V4 418 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 PTPN22Q9Y2R2 807 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 RRP15Q9Y3B9 282 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 KRIT1O00522 736 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 GFPT2O94808 682 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 PLA2G4BP0C869 781 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 ICA1Q05084 483 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 PRKG1Q13976 671 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 PPP1R7Q15435 360 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 ADGRF4Q8IZF3 695 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 CAPS2Q9BXY5 557 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 CTTNBP2NLQ9P2B4 639 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 TRIM65Q6PJ69 517 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-206ENST00000437932 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 ARL6IP4Q66PJ3 421 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 CCDC151A5D8V7 595 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 HEXIM1O94992 359 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 AKR1B1P15121 316 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 MAN2A1Q16706 1144 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 C12orf60Q5U649 245 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 MICALCLQ6ZW33 695 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 GSTA5Q7RTV2 222 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 TICAM2Q86XR7 235 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 GOLGA5Q8TBA6 731 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 RIOK1Q9BRS2 568 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 ADAMTS1Q9UHI8 967 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 COL4A3BPQ9Y5P4 624 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 STXBP3O00186 592 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 ZBED6P86452 979 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 UTP11Q9Y3A2 253 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 RPL13P26373 211 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 GALNT17Q6IS24 598 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 MIGA2Q7L4E1 593 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 RAD54LQ92698 747 aa12.82□□□□□ -0.36
PDLIM5-206ENST00000437932 CTNNA1P35221 906 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 CPLX4Q7Z7G2 160 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 LMBR1Q8WVP7 490 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 CD209Q9NNX6 404 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 ADCY1Q08828 1119 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 TROAPQ12815 778 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 COASYQ13057 564 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 SEC23AQ15436 765 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 CDC37Q16543 378 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 BCAS4Q8TDM0 211 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 ARMCX3Q9UH62 379 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 USTQ9Y2C2 406 aa12.81□□□□□ -0.36
PDLIM5-206ENST00000437932 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms