RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 WWC2Q6AWC2 1192 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 KCNV1Q6PIU1 500 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 CHRDL2Q6WN34 429 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 IL31RAQ8NI17 732 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.58
SMPD4-207ENST00000435455 SEZ6LQ9BYH1 1024 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 PDRG1Q9NUG6 133 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 MRVI1Q9Y6F6 885 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 MROH7Q68CQ1 1323 aa18.7■□□□□ 0.58
SMPD4-207ENST00000435455 MYH7BA7E2Y1 1941 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 DCDC2CA8MYV0 355 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 GH1P01241 217 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 PDIA3P30101 505 aaKnown RBP18.69■□□□□ 0.58
SMPD4-207ENST00000435455 NAPAP54920 295 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 XRRA1Q6P2D8 792 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 ANKRD33Q7Z3H0 272 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 COPS5Q92905 334 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 ZNF274Q96GC6 653 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-207ENST00000435455 TOX2Q96NM4 488 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 GLT8D2Q9H1C3 349 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 BARHL2Q9NY43 387 aa18.69■□□□□ 0.58
SMPD4-207ENST00000435455 COLQQ9Y215 455 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-207ENST00000435455 RANBP2P49792 3224 aaKnown RBP18.68■□□□□ 0.58
SMPD4-207ENST00000435455 A6NJR5 290 aa18.68■□□□□ 0.58
SMPD4-207ENST00000435455 ARVCFO00192 962 aa18.68■□□□□ 0.58
SMPD4-207ENST00000435455 KPNA6O60684 536 aa18.68■□□□□ 0.58
SMPD4-207ENST00000435455 TGFB3P10600 412 aa18.68■□□□□ 0.58
SMPD4-207ENST00000435455 AKAP17AQ02040 695 aaKnown RBP18.68■□□□□ 0.58
SMPD4-207ENST00000435455 LY6KQ17RY6 165 aa18.68■□□□□ 0.58
SMPD4-207ENST00000435455 GDF15Q99988 308 aa18.68■□□□□ 0.58
SMPD4-207ENST00000435455 PDLIM7Q9NR12 457 aa18.68■□□□□ 0.58
SMPD4-207ENST00000435455 DDX41Q9UJV9 622 aaKnown RBP18.68■□□□□ 0.58
SMPD4-207ENST00000435455 SPDYE3A6NKU9 549 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 STXBP3O00186 592 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 PQBP1O60828 265 aaKnown RBP18.67■□□□□ 0.58
SMPD4-207ENST00000435455 RGS20O76081 388 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 SCG2P13521 617 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 IFNAR1P17181 557 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 MAGEA10P43363 369 aaPredicted RBP18.67■□□□□ 0.58
SMPD4-207ENST00000435455 CDK7P50613 346 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 ADCY7P51828 1080 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 PFKFB3Q16875 520 aaPredicted RBP18.67■□□□□ 0.58
SMPD4-207ENST00000435455 GNPTABQ3T906 1256 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 IL17RAQ96F46 866 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 LBHD1Q9BQE6 289 aaPredicted RBP18.67■□□□□ 0.58
SMPD4-207ENST00000435455 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
SMPD4-207ENST00000435455 PRO3102Q9H379 93 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 EHMT1Q9H9B1 1298 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 RIC8AQ9NPQ8 531 aa18.67■□□□□ 0.58
SMPD4-207ENST00000435455 PRPF3O43395 683 aaKnown RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 MYL3P08590 195 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 CLTBP09497 229 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 BMP8BP34820 402 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 CCT2P78371 535 aaKnown RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 MRPS9P82933 396 aaKnown RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 ARHGAP1Q07960 439 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 ITGA7Q13683 1181 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 NTRK3Q16288 839 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 UBE2SQ16763 222 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 HABP4Q5JVS0 413 aaKnown RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 PCNX4Q63HM2 1172 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 SLC43A3Q8NBI5 491 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 CCDC12Q8WUD4 166 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 EMID1Q96A84 441 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 INPP4AQ96PE3 977 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 RNF26Q9BY78 433 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 NCOA5Q9HCD5 579 aaKnown RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 PRDM5Q9NQX1 630 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-207ENST00000435455 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
SMPD4-207ENST00000435455 LTBP2Q14767 1821 aa18.65■□□□□ 0.58
SMPD4-207ENST00000435455 A0A1W2PPC1 479 aa18.65■□□□□ 0.58
SMPD4-207ENST00000435455 TLR3O15455 904 aaKnown RBP18.65■□□□□ 0.58
SMPD4-207ENST00000435455 FOSP01100 380 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-207ENST00000435455 PURAQ00577 322 aaKnown RBP18.65■□□□□ 0.58
SMPD4-207ENST00000435455 LAMC2Q13753 1193 aa18.65■□□□□ 0.58
SMPD4-207ENST00000435455 ANKRD1Q15327 319 aa18.65■□□□□ 0.58
SMPD4-207ENST00000435455 TYW1BQ6NUM6 668 aa18.65■□□□□ 0.58
SMPD4-207ENST00000435455 CPLX2Q6PUV4 134 aaKnown RBP18.65■□□□□ 0.58
SMPD4-207ENST00000435455 DHX37Q8IY37 1157 aaKnown RBP18.65■□□□□ 0.58
SMPD4-207ENST00000435455 AFG1LQ8WV93 481 aa18.65■□□□□ 0.58
SMPD4-207ENST00000435455 MTG1Q9BT17 334 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-207ENST00000435455 SMCO2A6NFE2 343 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 CPLX1O14810 134 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 SEC24BO95487 1268 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 ICAM3P32942 547 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 TRIM22Q8IYM9 498 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 PHKBQ93100 1093 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 SLC26A6Q9BXS9 759 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 TMEM39AQ9NV64 488 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 PCDHA6Q9UN73 950 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 PCDHA8Q9Y5H6 950 aa18.64■□□□□ 0.57
SMPD4-207ENST00000435455 ESYT2A0FGR8 921 aa18.63■□□□□ 0.57
SMPD4-207ENST00000435455 TRIM43BA6NCK2 446 aa18.63■□□□□ 0.57
SMPD4-207ENST00000435455 KIAA0355O15063 1070 aa18.63■□□□□ 0.57
SMPD4-207ENST00000435455 FIBPO43427 364 aa18.63■□□□□ 0.57
SMPD4-207ENST00000435455 GGPS1O95749 300 aa18.63■□□□□ 0.57
SMPD4-207ENST00000435455 MMP3P08254 477 aa18.63■□□□□ 0.57
SMPD4-207ENST00000435455 FAAP100Q0VG06 881 aa18.63■□□□□ 0.57
SMPD4-207ENST00000435455 PKN1Q16512 942 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms