RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 SMCR8Q8TEV9 937 aaPredicted RBP13.52□□□□□ -0.24
CLDN4-203ENST00000435050 INTS13Q9NVM9 706 aa13.52□□□□□ -0.24
CLDN4-203ENST00000435050 A0A1B0GTH6 734 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 CYLC1P35663 651 aaPredicted RBP13.52□□□□□ -0.25
CLDN4-203ENST00000435050 NR1I3Q14994 352 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 NBPF9Q3BBW0 867 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 TMTC1Q8IUR5 882 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 ADSSL1Q8N142 457 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 NEK11Q8NG66 645 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 DHTKD1Q96HY7 919 aaPredicted RBP13.52□□□□□ -0.25
CLDN4-203ENST00000435050 MRPL44Q9H9J2 332 aaKnown RBP13.52□□□□□ -0.25
CLDN4-203ENST00000435050 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.25
CLDN4-203ENST00000435050 STK17AQ9UEE5 414 aa13.52□□□□□ -0.25
CLDN4-203ENST00000435050 MFAP3LO75121 409 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 DNM2P50570 870 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 RRAGAQ7L523 313 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 MYCT1Q8N699 235 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 RDH13Q8NBN7 331 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 SPAG5Q96R06 1193 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 TRAF1Q13077 416 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 RASA3Q14644 834 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 SH3RF1Q7Z6J0 888 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 RAD54LQ92698 747 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 LRP5O75197 1615 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
CLDN4-203ENST00000435050 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLDN4-203ENST00000435050 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 NT5DC1Q5TFE4 455 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 SAMD7Q7Z3H4 446 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 C4orf32Q8N8J7 132 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 ERO1AQ96HE7 468 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 DNAJC18Q9H819 358 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
CLDN4-203ENST00000435050 ZNRF3Q9ULT6 936 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 KDM3AQ9Y4C1 1321 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 EP400Q96L91 3159 aa13.51□□□□□ -0.25
CLDN4-203ENST00000435050 ROBO3Q96MS0 1386 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 YDJCA8MPS7 323 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
CLDN4-203ENST00000435050 ZNF18P17022 549 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 GRB10Q13322 594 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 TBC1D5Q92609 795 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 PSMB7Q99436 277 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLDN4-203ENST00000435050 RGL1Q9NZL6 768 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 ENTPD3O75355 529 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 RAPGEF1Q13905 1077 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 SH3BP5LQ7L8J4 393 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 MAGEF1Q9HAY2 307 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLDN4-203ENST00000435050 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
CLDN4-203ENST00000435050 PPP2R3AQ06190 1150 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 TMCO3Q6UWJ1 677 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 SNED1Q8TER0 1413 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
CLDN4-203ENST00000435050 TTC26A0AVF1 554 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 FOSP01100 380 aaPredicted RBP13.5□□□□□ -0.25
CLDN4-203ENST00000435050 KLK7P49862 253 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 CYP27A1Q02318 531 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 TRIM14Q14142 442 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 UNC13DQ70J99 1090 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 ANKRD13CQ8N6S4 541 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 CYP2W1Q8TAV3 490 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 SH2D3AQ9BRG2 576 aa13.5□□□□□ -0.25
CLDN4-203ENST00000435050 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 CETN3O15182 167 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 RHOXF2BP0C7M4 288 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 EEF1GP26641 437 aaKnown RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 HOOK2Q96ED9 719 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 MED15Q96RN5 788 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 RHOXF2Q9BQY4 288 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 CLIC2O15247 247 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 USO1O60763 962 aaKnown RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 RHOBTB3O94955 611 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 SMARCA1P28370 1054 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 CXCL9Q07325 125 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 KCNK18Q7Z418 384 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 CHP1Q99653 195 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 RAVER2Q9HCJ3 691 aaKnown RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 KBTBD4Q9NVX7 518 aa13.49□□□□□ -0.25
CLDN4-203ENST00000435050 HERC5Q9UII4 1024 aaKnown RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 EPN1Q9Y6I3 576 aaPredicted RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 PPP1R12BO60237 982 aaPredicted RBP13.49□□□□□ -0.25
CLDN4-203ENST00000435050 PRPF6O94906 941 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms