RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HAS1Q92839 578 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 NUDT12Q9BQG2 462 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 GLT8D2Q9H1C3 349 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 DNAJC18Q9H819 358 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 AGPAT5Q9NUQ2 364 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 ZNHIT6Q9NWK9 470 aaKnown RBP20.71■□□□□ 0.91
CLK1-205ENST00000434813 ATF5Q9Y2D1 282 aaPredicted RBP20.71■□□□□ 0.91
CLK1-205ENST00000434813 POTEB2H3BUK9 544 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 PSMD14O00487 310 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 CYLC1P35663 651 aaPredicted RBP20.7■□□□□ 0.9
CLK1-205ENST00000434813 SLC16A2P36021 539 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 PLA2G4AP47712 749 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 KLK7P49862 253 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 CDK17Q00537 523 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 CC2D2BQ6DHV5 1058 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 CCDC170Q8IYT3 715 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 SLC16A10Q8TF71 515 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 PSTPIP2Q9H939 334 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 PUF60Q9UHX1 559 aaKnown RBP20.7■□□□□ 0.9
CLK1-205ENST00000434813 ZNF646O15015 1829 aaPredicted RBP20.7■□□□□ 0.9
CLK1-205ENST00000434813 CCDC151A5D8V7 595 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 TBC1D8O95759 1140 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 ATP2B2Q01814 1243 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 PSMD2Q13200 908 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 BRD3Q15059 726 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 DYMQ7RTS9 669 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 KCNK18Q7Z418 384 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 DHX36Q9H2U1 1008 aaKnown RBP20.7■□□□□ 0.9
CLK1-205ENST00000434813 ARFGAP3Q9NP61 516 aa20.7■□□□□ 0.9
CLK1-205ENST00000434813 KDM3AQ9Y4C1 1321 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 FGFR1OPO95684 399 aaKnown RBP20.69■□□□□ 0.9
CLK1-205ENST00000434813 SEPT2Q15019 361 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 HYIQ5T013 277 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 MSANTD4Q8NCY6 345 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 DCAF4Q8WV16 495 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 DDX12PQ92771 950 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 ZSWIM4Q9H7M6 989 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 TRIM10Q9UDY6 481 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 GUCA1BQ9UMX6 200 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 SLX4Q8IY92 1834 aa20.69■□□□□ 0.9
CLK1-205ENST00000434813 EIF3CLB5ME19 914 aaKnown RBP20.68■□□□□ 0.9
CLK1-205ENST00000434813 TERF2Q15554 542 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 VWA3BQ502W6 1294 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 ZFPM1Q8IX07 1006 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 EHBP1Q8NDI1 1231 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 MKL1Q969V6 931 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 PCMTD1Q96MG8 357 aaPredicted RBP20.68■□□□□ 0.9
CLK1-205ENST00000434813 EIF3CQ99613 913 aaKnown RBP20.68■□□□□ 0.9
CLK1-205ENST00000434813 MRIQ9BWK5 157 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 ANKZF1Q9H8Y5 726 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 NKRFO15226 690 aaKnown RBP eCLIP20.68■□□□□ 0.9
CLK1-205ENST00000434813 FKBP1AP62942 108 aaKnown RBP20.68■□□□□ 0.9
CLK1-205ENST00000434813 ECM1Q16610 540 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 MAN2A1Q16706 1144 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 SUPT20HQ8NEM7 779 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 C7orf43Q8WVR3 580 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 NYAP2Q9P242 653 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 MYO6Q9UM54 1294 aa20.68■□□□□ 0.9
CLK1-205ENST00000434813 GOLGB1Q14789 3259 aaKnown RBP20.68■□□□□ 0.9
CLK1-205ENST00000434813 CTAGE15A4D2H0 777 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 SLC26A4O43511 780 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 ECE2O60344 883 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 CTAGE8P0CG41 777 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 IDEP14735 1019 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 HNRNPH3P31942 346 aaKnown RBP20.67■□□□□ 0.9
CLK1-205ENST00000434813 QRICH1Q2TAL8 776 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 CCDC122Q5T0U0 273 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 LRRC55Q6ZSA7 311 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 CTAGE6Q86UF2 777 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 CTAGE4Q8IX94 777 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 NDST4Q9H3R1 872 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 NHEJ1Q9H9Q4 299 aaPredicted RBP20.67■□□□□ 0.9
CLK1-205ENST00000434813 RAB21Q9UL25 225 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 SIK3Q9Y2K2 1263 aa20.67■□□□□ 0.9
CLK1-205ENST00000434813 SASH3O75995 380 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 IPO7O95373 1038 aaKnown RBP20.66■□□□□ 0.9
CLK1-205ENST00000434813 FAM193AP78312 1265 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 HDLBPQ00341 1268 aaKnown RBP20.66■□□□□ 0.9
CLK1-205ENST00000434813 STRIP1Q5VSL9 837 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 TRAPPC11Q7Z392 1133 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 DNAJC19Q96DA6 116 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 IDI2Q9BXS1 227 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 UBXN6Q9BZV1 441 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 NT5C3AQ9H0P0 336 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 ST7Q9NRC1 585 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 PCDHA12Q9UN75 941 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 KRT86O43790 486 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 KIAA1328Q86T90 577 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 HNRNPLLQ8WVV9 542 aaKnown RBP20.66■□□□□ 0.9
CLK1-205ENST00000434813 JAKMIP2Q96AA8 810 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 TSG101Q99816 390 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 KANSL2Q9H9L4 492 aa20.66■□□□□ 0.9
CLK1-205ENST00000434813 C21orf2O43822 256 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 MARCH6O60337 910 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
CLK1-205ENST00000434813 SLURP2P0DP57 97 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 EEF2P13639 858 aaKnown RBP20.65■□□□□ 0.9
CLK1-205ENST00000434813 SLC1A4P43007 532 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 COASYQ13057 564 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms