RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
APOE-203ENST00000434152 Q9Y3F1 56 aa23.4■■□□□ 1.34
APOE-203ENST00000434152 LTBP2Q14767 1821 aa23.4■■□□□ 1.34
APOE-203ENST00000434152 A0A0U1RQG5 324 aaPredicted RBP23.39■■□□□ 1.33
APOE-203ENST00000434152 CFBP00751 764 aa23.39■■□□□ 1.33
APOE-203ENST00000434152 FSCN1Q16658 493 aaKnown RBP23.39■■□□□ 1.33
APOE-203ENST00000434152 CXCL17Q6UXB2 119 aa23.39■■□□□ 1.33
APOE-203ENST00000434152 CCDC82Q8N4S0 544 aa23.39■■□□□ 1.33
APOE-203ENST00000434152 NSUN6Q8TEA1 469 aaKnown RBP23.39■■□□□ 1.33
APOE-203ENST00000434152 IWS1Q96ST2 819 aa23.39■■□□□ 1.33
APOE-203ENST00000434152 MROH7Q68CQ1 1323 aa23.38■■□□□ 1.33
APOE-203ENST00000434152 GCOM1H8Y6P7 765 aaPredicted RBP23.38■■□□□ 1.33
APOE-203ENST00000434152 PIK3CDO00329 1044 aa23.38■■□□□ 1.33
APOE-203ENST00000434152 POLR2MP0CAP2 368 aa23.38■■□□□ 1.33
APOE-203ENST00000434152 NTRK3Q16288 839 aa23.38■■□□□ 1.33
APOE-203ENST00000434152 PPP1R18Q6NYC8 613 aa23.38■■□□□ 1.33
APOE-203ENST00000434152 C22orf23Q9BZE7 217 aa23.38■■□□□ 1.33
APOE-203ENST00000434152 UPF2Q9HAU5 1272 aaKnown RBP23.38■■□□□ 1.33
APOE-203ENST00000434152 TBX21Q9UL17 535 aa23.38■■□□□ 1.33
APOE-203ENST00000434152 PRPF3O43395 683 aaKnown RBP23.37■■□□□ 1.33
APOE-203ENST00000434152 TIMP1P01033 207 aa23.37■■□□□ 1.33
APOE-203ENST00000434152 IFNAR1P17181 557 aa23.37■■□□□ 1.33
APOE-203ENST00000434152 FAM109BQ6ICB4 259 aaPredicted RBP23.37■■□□□ 1.33
APOE-203ENST00000434152 PIBF1Q8WXW3 757 aa23.37■■□□□ 1.33
APOE-203ENST00000434152 COL20A1Q9P218 1284 aa23.37■■□□□ 1.33
APOE-203ENST00000434152 V9GY48 417 aaPredicted RBP23.37■■□□□ 1.33
APOE-203ENST00000434152 ZEB2O60315 1214 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 CABYRO75952 493 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 FPGSQ05932 587 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 DUSP28Q4G0W2 176 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 FAM126BQ8IXS8 530 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 SLC43A3Q8NBI5 491 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 TAAR1Q96RJ0 339 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 RMDN3Q96TC7 470 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 RNF26Q9BY78 433 aaPredicted RBP23.36■■□□□ 1.33
APOE-203ENST00000434152 WDR11Q9BZH6 1224 aa23.36■■□□□ 1.33
APOE-203ENST00000434152 RBM47A0AV96 593 aaKnown RBP23.35■■□□□ 1.33
APOE-203ENST00000434152 NEK4P51957 841 aa23.35■■□□□ 1.33
APOE-203ENST00000434152 AK2P54819 239 aa23.35■■□□□ 1.33
APOE-203ENST00000434152 PFKFB3Q16875 520 aaPredicted RBP23.35■■□□□ 1.33
APOE-203ENST00000434152 GRIN2DO15399 1336 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 PDE4DQ08499 809 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 ITGA7Q13683 1181 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 MFSD5Q6N075 450 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 CUL5Q93034 780 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 KIF2CQ99661 725 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 GLT8D2Q9H1C3 349 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 PSTPIP2Q9H939 334 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 PXMP2Q9NR77 195 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 BARHL2Q9NY43 387 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 STXBP5LQ9Y2K9 1186 aa23.34■■□□□ 1.33
APOE-203ENST00000434152 FRMPD4Q14CM0 1322 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 KIAA1217Q5T5P2 1943 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 MEIS2O14770 477 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 TLR3O15455 904 aaKnown RBP23.33■■□□□ 1.33
APOE-203ENST00000434152 PFKFB2O60825 505 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 CD4P01730 458 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 ARHGEF16Q5VV41 709 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 WWC2Q6AWC2 1192 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 CPLX2Q6PUV4 134 aaKnown RBP23.33■■□□□ 1.33
APOE-203ENST00000434152 HEATR3Q7Z4Q2 680 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 FAM161BQ96MY7 647 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 TPCN1Q9ULQ1 816 aa23.33■■□□□ 1.33
APOE-203ENST00000434152 hCG_1642624A0A1W2PR95 340 aa23.32■■□□□ 1.32
APOE-203ENST00000434152 SCG2P13521 617 aa23.32■■□□□ 1.32
APOE-203ENST00000434152 PSMC6P62333 389 aa23.32■■□□□ 1.32
APOE-203ENST00000434152 CCT2P78371 535 aaKnown RBP23.32■■□□□ 1.32
APOE-203ENST00000434152 STXBP2Q15833 593 aa23.32■■□□□ 1.32
APOE-203ENST00000434152 RNPC3Q96LT9 517 aaKnown RBP23.32■■□□□ 1.32
APOE-203ENST00000434152 SLKQ9H2G2 1235 aaPredicted RBP23.32■■□□□ 1.32
APOE-203ENST00000434152 CPLX1O14810 134 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 NR3C2P08235 984 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 HOXA13P31271 388 aaPredicted RBP23.31■■□□□ 1.32
APOE-203ENST00000434152 SMAD3P84022 425 aaKnown RBP23.31■■□□□ 1.32
APOE-203ENST00000434152 AKAP17AQ02040 695 aaKnown RBP23.31■■□□□ 1.32
APOE-203ENST00000434152 PKN1Q16512 942 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 C16orf59Q7L2K0 433 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 TRIM22Q8IYM9 498 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 FAM177A1Q8N128 213 aaPredicted RBP23.31■■□□□ 1.32
APOE-203ENST00000434152 SLC17A8Q8NDX2 589 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 SMARCC2Q8TAQ2 1214 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 CCDC12Q8WUD4 166 aaPredicted RBP23.31■■□□□ 1.32
APOE-203ENST00000434152 GUCD1Q96NT3 240 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 PDCD2LQ9BRP1 358 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 PPP1R12CQ9BZL4 782 aa23.31■■□□□ 1.32
APOE-203ENST00000434152 NCOA5Q9HCD5 579 aaKnown RBP23.31■■□□□ 1.32
APOE-203ENST00000434152 ESYT2A0FGR8 921 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 STXBP3O00186 592 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 EIF3JO75822 258 aaKnown RBP23.3■■□□□ 1.32
APOE-203ENST00000434152 STAM2O75886 525 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 CDKL5O76039 1030 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 NAPAP54920 295 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 ZNF697Q5TEC3 545 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 VSIG10LQ86VR7 867 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 SCFD2Q8WU76 684 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 GPKOWQ92917 476 aaPredicted RBP eCLIP23.3■■□□□ 1.32
APOE-203ENST00000434152 SEZ6LQ9BYH1 1024 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 RIC8AQ9NPQ8 531 aa23.3■■□□□ 1.32
APOE-203ENST00000434152 NKRFO15226 690 aaKnown RBP eCLIP23.29■■□□□ 1.32
APOE-203ENST00000434152 CSF2RAP15509 400 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms