RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 CYP2R1Q6VVX0 501 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 NLRX1Q86UT6 975 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 KSR1Q8IVT5 923 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 CLEC1BQ9P126 229 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 EID1Q9Y6B2 187 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 WTIPA6NIX2 430 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-213ENST00000433709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-213ENST00000433709 TBC1D8O95759 1140 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 THBDP07204 575 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 SNRPB2P08579 225 aaKnown RBP8.16□□□□□ -1.1
HDAC9-213ENST00000433709 PLS3P13797 630 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 DNMT1P26358 1616 aaKnown RBP8.16□□□□□ -1.1
HDAC9-213ENST00000433709 HOXC12P31275 282 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 ECI1P42126 302 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 LAPTM5Q13571 262 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 MTERF2Q49AM1 385 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 CPNE8Q86YQ8 564 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 JAMLQ86YT9 394 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 SGSM3Q96HU1 749 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 SRPK1Q96SB4 655 aaKnown RBP8.16□□□□□ -1.1
HDAC9-213ENST00000433709 OSBPL2Q9H1P3 480 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 UGGT1Q9NYU2 1555 aa8.16□□□□□ -1.1
HDAC9-213ENST00000433709 ABCC3O15438 1527 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 IQCA1LA6NCM1 817 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 DIAPH1O60610 1272 aaKnown RBP8.15□□□□□ -1.1
HDAC9-213ENST00000433709 KCNJ6P48051 423 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 SNX17Q15036 470 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 PRSS53Q2L4Q9 553 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 GALNT18Q6P9A2 607 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 FRS2Q8WU20 508 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 SPATA9Q9BWV2 254 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 ARHGEF4Q9NR80 690 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 SLC52A1Q9NWF4 448 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.15□□□□□ -1.1
HDAC9-213ENST00000433709 IMPACTQ9P2X3 320 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 YBX2Q9Y2T7 364 aaKnown RBP8.15□□□□□ -1.1
HDAC9-213ENST00000433709 TAF6LQ9Y6J9 622 aa8.15□□□□□ -1.1
HDAC9-213ENST00000433709 SPATA31D1Q6ZQQ2 1576 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC9-213ENST00000433709 NPHP3-ACAD11A0A0J9YXS1 232 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 ARNTLO00327 626 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 TOM1O60784 492 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 PRKCAP17252 672 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 PAMP19021 973 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-213ENST00000433709 MPZL3Q6UWV2 235 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 TMEM145Q8NBT3 493 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 KREMEN2Q8NCW0 462 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 MKL1Q969V6 931 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 ZNF669Q96BR6 464 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-213ENST00000433709 IER2Q9BTL4 223 aa8.14□□□□□ -1.11
HDAC9-213ENST00000433709 CWC22Q9HCG8 908 aaKnown RBP8.14□□□□□ -1.11
HDAC9-213ENST00000433709 CPS1P31327 1500 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 PRDM15P57071 1507 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-213ENST00000433709 ADGRL2O95490 1459 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 ERVK-7P63135 1459 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 ROCK1Q13464 1354 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 SCG5P05408 212 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 MSL3P1P0C860 447 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 GFRA1P56159 465 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 MVKQ03426 396 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 SSRP1Q08945 709 aaKnown RBP8.13□□□□□ -1.11
HDAC9-213ENST00000433709 BMS1Q14692 1282 aaKnown RBP8.13□□□□□ -1.11
HDAC9-213ENST00000433709 CCDC144BQ3MJ40 725 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 YOD1Q5VVQ6 348 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-213ENST00000433709 DENND5AQ6IQ26 1287 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
HDAC9-213ENST00000433709 NUP43Q8NFH3 380 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 DNAJC7Q99615 494 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 TMEFF2Q9UIK5 374 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-213ENST00000433709 ACSL6Q9UKU0 697 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 CROCC2H7BZ55 1655 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 MED14O60244 1454 aa8.13□□□□□ -1.11
HDAC9-213ENST00000433709 RPRD2Q5VT52 1461 aaKnown RBP8.13□□□□□ -1.11
HDAC9-213ENST00000433709 ANKRD50Q9ULJ7 1429 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 DEPDC5O75140 1603 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 LTBP4Q8N2S1 1624 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 A0A1W2PQ27 194 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 A0A1W2PQ64 194 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 A0A1W2PQC6 194 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 A0A1W2PQD8 194 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 ADCY3O60266 1144 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 SDHBP21912 280 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 L1CAMP32004 1257 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 IFRD2Q12894 506 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-213ENST00000433709 MBLAC2Q68D91 279 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 PRR23BQ6ZRT6 265 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 AARSD1Q9BTE6 412 aaKnown RBP8.12□□□□□ -1.11
HDAC9-213ENST00000433709 ZSWIM4Q9H7M6 989 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 USP35Q9P2H5 1018 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 LMTK2Q8IWU2 1503 aa8.12□□□□□ -1.11
HDAC9-213ENST00000433709 NPHP4O75161 1426 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-213ENST00000433709 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 ZNF335Q9H4Z2 1342 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-213ENST00000433709 PRODHO43272 600 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms