RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 CAP1Q01518 475 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 CCDC144BQ3MJ40 725 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 EMC4Q5J8M3 183 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 LBX2Q6XYB7 198 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 ATG14Q6ZNE5 492 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 NLRP10Q86W26 655 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 MZB1Q8WU39 189 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 SIGLEC10Q96LC7 697 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 PHF20Q9BVI0 1012 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 CDIP1Q9H305 208 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 EPB41L1Q9H4G0 881 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 ZSWIM4Q9H7M6 989 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 DBR1Q9UK59 544 aaKnown RBP5.16□□□□□ -1.58
LINC01239-201ENST00000433645 MRPS23Q9Y3D9 190 aaKnown RBP5.16□□□□□ -1.58
LINC01239-201ENST00000433645 PCDHA5Q9Y5H7 936 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 ZC3H12DA2A288 527 aaKnown RBP5.15□□□□□ -1.59
LINC01239-201ENST00000433645 WNT9AO14904 365 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 KCNQ2O43526 872 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 EFCAB14O75071 495 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 C6orf222P0C671 652 aaPredicted RBP5.15□□□□□ -1.59
LINC01239-201ENST00000433645 C1QTNF9P0C862 333 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 PFKLP17858 780 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 TRIM61Q5EBN2 209 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 FOXB2Q5VYV0 432 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 CILP2Q8IUL8 1156 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 TEX2Q8IWB9 1127 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 LILRB2Q8N423 598 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 EXOC2Q96KP1 924 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 TOX2Q96NM4 488 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 PDGFDQ9GZP0 370 aaPredicted RBP5.15□□□□□ -1.59
LINC01239-201ENST00000433645 KCNK12Q9HB15 430 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 PCDH18Q9HCL0 1135 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 SMG5Q9UPR3 1016 aaKnown RBP5.15□□□□□ -1.59
LINC01239-201ENST00000433645 ZNF652Q9Y2D9 606 aa5.15□□□□□ -1.59
LINC01239-201ENST00000433645 HGSO14964 777 aaPredicted RBP5.14□□□□□ -1.59
LINC01239-201ENST00000433645 MAFKO60675 156 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 DGKIO75912 1065 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 NCAM1P13591 858 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 IGFBP6P24592 240 aaPredicted RBP5.14□□□□□ -1.59
LINC01239-201ENST00000433645 CDR1P51861 262 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 BMS1Q14692 1282 aaKnown RBP5.14□□□□□ -1.59
LINC01239-201ENST00000433645 KCNA10Q16322 511 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 FAM209AQ5JX71 171 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 IGDCC3Q8IVU1 814 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 SYNPOQ8N3V7 929 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 PHOSPHO1Q8TCT1 267 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC01239-201ENST00000433645 MRPL4Q9BYD3 311 aaKnown RBP5.14□□□□□ -1.59
LINC01239-201ENST00000433645 NGRNQ9NPE2 291 aaKnown RBP5.14□□□□□ -1.59
LINC01239-201ENST00000433645 CLDND1Q9NY35 253 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 IRAK3Q9Y616 596 aa5.14□□□□□ -1.59
LINC01239-201ENST00000433645 RFXAPO00287 272 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 SGSM2O43147 1006 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 MSCO60682 206 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 TADA3O75528 432 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 FPR2P25090 351 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 LINC00310P59036 64 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 ZNF200P98182 395 aaPredicted RBP5.13□□□□□ -1.59
LINC01239-201ENST00000433645 ZNF385BQ569K4 471 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 AMIGO3Q86WK7 504 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 MIB1Q86YT6 1006 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 TMEM151BQ8IW70 566 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 ALG3Q92685 438 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 CHAMP1Q96JM3 812 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 ALG1Q9BT22 464 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 BTG4Q9NY30 223 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 HSPBP1Q9NZL4 362 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 NUB1Q9Y5A7 615 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 PTCH2Q9Y6C5 1203 aa5.13□□□□□ -1.59
LINC01239-201ENST00000433645 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
LINC01239-201ENST00000433645 FAM47E-STBD1D6RA91 191 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 KRIT1O00522 736 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 APPP05067 770 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 GRK2P25098 689 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 GRK3P35626 688 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 EPHB3P54753 998 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 PAK1Q13153 545 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 ZNF124Q15973 351 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 HABP4Q5JVS0 413 aaKnown RBP5.12□□□□□ -1.59
LINC01239-201ENST00000433645 STEAP3Q658P3 488 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 KCNT2Q6UVM3 1135 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 B3GNT8Q7Z7M8 397 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 TRIM48Q8IWZ4 208 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 NLGN1Q8N2Q7 840 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 GSTCDQ8NEC7 633 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 SGPP1Q9BX95 441 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 SMOC1Q9H4F8 434 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 SLC6A20Q9NP91 592 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 TMEM260Q9NX78 707 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 CNOT6Q9ULM6 557 aaKnown RBP5.12□□□□□ -1.59
LINC01239-201ENST00000433645 ASXL2Q76L83 1435 aa5.12□□□□□ -1.59
LINC01239-201ENST00000433645 ARVCFO00192 962 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 PLD2O14939 933 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 GSTA4O15217 222 aa5.11□□□□□ -1.59
LINC01239-201ENST00000433645 BUB1BO60566 1050 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms