RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 PRPHP41219 470 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 UBE2HP62256 183 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 CEP55Q53EZ4 464 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 PRR16Q569H4 304 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 ADALQ6DHV7 355 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 MTMR9Q96QG7 549 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 LCTP09848 1927 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 SOWAHBA6NEL2 793 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 OR52Z1P0C646 297 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 CCND2P30279 289 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 CALCRLQ16602 461 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 AXDND1Q5T1B0 1012 aaPredicted RBP30■■■□□ 2.39
TMEM248-205ENST00000433271 CYP2W1Q8TAV3 490 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 LENG9Q96B70 501 aa30■■■□□ 2.39
TMEM248-205ENST00000433271 ASTN1O14525 1302 aa29.99■■■□□ 2.39
TMEM248-205ENST00000433271 IGLV3-22A0A075B6J6 115 aa29.99■■■□□ 2.39
TMEM248-205ENST00000433271 MEIS1O00470 390 aa29.99■■■□□ 2.39
TMEM248-205ENST00000433271 ADORA2AP29274 412 aa29.99■■■□□ 2.39
TMEM248-205ENST00000433271 ALDH5A1P51649 535 aaPredicted RBP29.99■■■□□ 2.39
TMEM248-205ENST00000433271 C1QTNF8P60827 252 aa29.99■■■□□ 2.39
TMEM248-205ENST00000433271 MRPS9P82933 396 aaKnown RBP29.99■■■□□ 2.39
TMEM248-205ENST00000433271 GRB14Q14449 540 aa29.99■■■□□ 2.39
TMEM248-205ENST00000433271 CUTAO60888 179 aa29.98■■■□□ 2.39
TMEM248-205ENST00000433271 MYCLP12524 364 aaPredicted RBP29.98■■■□□ 2.39
TMEM248-205ENST00000433271 MXRA8Q9BRK3 442 aa29.98■■■□□ 2.39
TMEM248-205ENST00000433271 UBIAD1Q9Y5Z9 338 aa29.98■■■□□ 2.39
TMEM248-205ENST00000433271 ZNFX1Q9P2E3 1918 aaKnown RBP29.98■■■□□ 2.39
TMEM248-205ENST00000433271 SLC15A5A6NIM6 579 aa29.97■■■□□ 2.39
TMEM248-205ENST00000433271 NIPA1Q7RTP0 329 aa29.97■■■□□ 2.39
TMEM248-205ENST00000433271 KCNMB3Q9NPA1 279 aa29.97■■■□□ 2.39
TMEM248-205ENST00000433271 RNF186Q9NXI6 227 aa29.97■■■□□ 2.39
TMEM248-205ENST00000433271 THSD7BQ9C0I4 1608 aa29.97■■■□□ 2.39
TMEM248-205ENST00000433271 B4DLN1 442 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 TBX3O15119 743 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 STAM2O75886 525 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 ITGB5P18084 799 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 SETQ01105 290 aaPredicted RBP29.96■■■□□ 2.39
TMEM248-205ENST00000433271 DTHD1Q6ZMT9 781 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 ZNF579Q8NAF0 562 aaKnown RBP29.96■■■□□ 2.39
TMEM248-205ENST00000433271 PLXNB2O15031 1838 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 LOC102724159A0A0B4J2E5 919 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 A0A1W2PQ27 194 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 A0A1W2PQ64 194 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 A0A1W2PQD8 194 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 TBC1D8O95759 1140 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 EDNRBP24530 442 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 PWP2Q15269 919 aaKnown RBP29.96■■■□□ 2.39
TMEM248-205ENST00000433271 IL17AQ16552 155 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 PLA2G4DQ86XP0 818 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 HAS1Q92839 578 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 ZFP91Q96JP5 570 aaPredicted RBP29.96■■■□□ 2.39
TMEM248-205ENST00000433271 FGD4Q96M96 766 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 CLIC6Q96NY7 704 aa29.96■■■□□ 2.39
TMEM248-205ENST00000433271 MPHOSPH6Q99547 160 aaKnown RBP29.96■■■□□ 2.39
TMEM248-205ENST00000433271 COBLO75128 1261 aa29.95■■■□□ 2.38
TMEM248-205ENST00000433271 TRPA1O75762 1119 aa29.95■■■□□ 2.38
TMEM248-205ENST00000433271 ZNF792Q3KQV3 632 aa29.95■■■□□ 2.38
TMEM248-205ENST00000433271 ETNPPLQ8TBG4 499 aa29.95■■■□□ 2.38
TMEM248-205ENST00000433271 JADE2Q9NQC1 790 aa29.95■■■□□ 2.38
TMEM248-205ENST00000433271 VWA3AA6NCI4 1184 aa29.94■■■□□ 2.38
TMEM248-205ENST00000433271 MARCH6O60337 910 aa29.94■■■□□ 2.38
TMEM248-205ENST00000433271 GRIN1Q05586 938 aa29.94■■■□□ 2.38
TMEM248-205ENST00000433271 STXBP2Q15833 593 aa29.94■■■□□ 2.38
TMEM248-205ENST00000433271 SLFN12Q8IYM2 578 aa29.94■■■□□ 2.38
TMEM248-205ENST00000433271 FAM20AQ96MK3 541 aa29.94■■■□□ 2.38
TMEM248-205ENST00000433271 MSH4O15457 936 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 EIF3JO75822 258 aaKnown RBP29.93■■■□□ 2.38
TMEM248-205ENST00000433271 TXKP42681 527 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 TPRNQ4KMQ1 711 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 MORN1Q5T089 497 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 DPP9Q86TI2 863 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 DIS3Q9Y2L1 958 aaKnown RBP29.93■■■□□ 2.38
TMEM248-205ENST00000433271 CMA1P23946 247 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 INPP4AQ96PE3 977 aaPredicted RBP29.93■■■□□ 2.38
TMEM248-205ENST00000433271 WDR11Q9BZH6 1224 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 CSRNP2Q9H175 543 aa29.93■■■□□ 2.38
TMEM248-205ENST00000433271 LONP1P36776 959 aaKnown RBP29.92■■■□□ 2.38
TMEM248-205ENST00000433271 PDE4DQ08499 809 aa29.92■■■□□ 2.38
TMEM248-205ENST00000433271 MTMR1Q13613 665 aa29.92■■■□□ 2.38
TMEM248-205ENST00000433271 ZNF467Q7Z7K2 595 aaPredicted RBP29.92■■■□□ 2.38
TMEM248-205ENST00000433271 KCNH7Q9NS40 1196 aa29.92■■■□□ 2.38
TMEM248-205ENST00000433271 SLC5A4Q9NY91 659 aa29.92■■■□□ 2.38
TMEM248-205ENST00000433271 ARP10275 920 aa29.91■■■□□ 2.38
TMEM248-205ENST00000433271 LACTBP83111 547 aaPredicted RBP29.91■■■□□ 2.38
TMEM248-205ENST00000433271 SHC4Q6S5L8 630 aa29.91■■■□□ 2.38
TMEM248-205ENST00000433271 NLRX1Q86UT6 975 aa29.91■■■□□ 2.38
TMEM248-205ENST00000433271 MORC4Q8TE76 937 aa29.91■■■□□ 2.38
TMEM248-205ENST00000433271 GPRASP2Q96D09 838 aa29.91■■■□□ 2.38
TMEM248-205ENST00000433271 TTC12Q9H892 705 aaPredicted RBP29.91■■■□□ 2.38
TMEM248-205ENST00000433271 PCDHA12Q9UN75 941 aa29.91■■■□□ 2.38
TMEM248-205ENST00000433271 ZNF236Q9UL36 1845 aa29.91■■■□□ 2.38
TMEM248-205ENST00000433271 ASB14A6NK59 587 aa29.9■■■□□ 2.38
TMEM248-205ENST00000433271 TNPO2O14787 897 aaKnown RBP29.9■■■□□ 2.38
TMEM248-205ENST00000433271 MAFGO15525 162 aa29.9■■■□□ 2.38
TMEM248-205ENST00000433271 MBD3O95983 291 aa29.9■■■□□ 2.38
TMEM248-205ENST00000433271 FXR2P51116 673 aaKnown RBP eCLIP29.9■■■□□ 2.38
TMEM248-205ENST00000433271 TMEM266Q2M3C6 531 aa29.9■■■□□ 2.38
TMEM248-205ENST00000433271 SKOR2Q2VWA4 1001 aaPredicted RBP29.9■■■□□ 2.38
TMEM248-205ENST00000433271 RESP18Q5W5W9 173 aa29.9■■■□□ 2.38
TMEM248-205ENST00000433271 GPT2Q8TD30 523 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms