RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 C21orf2O43822 256 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 SMARCA1P28370 1054 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 IRAK1P51617 712 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 PDE4DQ08499 809 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 PSMD2Q13200 908 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 CABP7Q86V35 215 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 CREG2Q8IUH2 290 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 ZNF713Q8N859 430 aaPredicted RBP16.37■□□□□ 0.21
DDX56-205ENST00000433257 SYN2Q92777 582 aaPredicted RBP16.37■□□□□ 0.21
DDX56-205ENST00000433257 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 PCDHA13Q9Y5I0 950 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 TNRC6CQ9HCJ0 1690 aaKnown RBP16.36■□□□□ 0.21
DDX56-205ENST00000433257 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
DDX56-205ENST00000433257 OR52Z1P0C646 297 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 GNA11P29992 359 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 GTF2A1P52655 376 aaPredicted RBP16.36■□□□□ 0.21
DDX56-205ENST00000433257 RPS8P62241 208 aaKnown RBP16.36■□□□□ 0.21
DDX56-205ENST00000433257 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
DDX56-205ENST00000433257 CFAP221Q4G0U5 840 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 EMC10Q5UCC4 262 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 MMS22LQ6ZRQ5 1243 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 ADGRA1Q86SQ6 560 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 SPATA4Q8NEY3 305 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 RAB34Q9BZG1 259 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 TRIM9Q9C026 710 aa16.36■□□□□ 0.21
DDX56-205ENST00000433257 AGPSO00116 658 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 PAK2Q13177 524 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 SEPT2Q15019 361 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 VWA3BQ502W6 1294 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 CENPPQ6IPU0 288 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 SND1Q7KZF4 910 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX56-205ENST00000433257 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 CD302Q8IX05 232 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 MREGQ8N565 214 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 NOX5Q96PH1 765 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 OSBPL9Q96SU4 736 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 TSG101Q99816 390 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 RIC8AQ9NPQ8 531 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 BARHL2Q9NY43 387 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 GGA2Q9UJY4 613 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 PCDHA6Q9UN73 950 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 PCDHA8Q9Y5H6 950 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 ROBO3Q96MS0 1386 aa16.35■□□□□ 0.21
DDX56-205ENST00000433257 hCG_1642624A0A1W2PR95 340 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 AKR1B10O60218 316 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 KIF11P52732 1056 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 ASIC1P78348 528 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 MIIPQ5JXC2 388 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 CELF1Q92879 486 aaKnown RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 CEP89Q96ST8 783 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 PAGR1Q9BTK6 254 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 LACRTQ9GZZ8 138 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 C6orf50Q9HD87 102 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 AGPAT5Q9NUQ2 364 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 MAPK8IP1Q9UQF2 711 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 MACROD2A1Z1Q3 448 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 CES2O00748 559 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 SLC26A4O43511 780 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 SRGAP2O75044 1071 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 ERLIN2O94905 339 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 PMS1P54277 932 aaKnown RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 SETQ01105 290 aaPredicted RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 C2orf54Q08AI8 447 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 NONOQ15233 471 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDX56-205ENST00000433257 GRIPAP1Q4V328 841 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 SWT1Q5T5J6 900 aaKnown RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 GUF1Q8N442 669 aaKnown RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 PNMA1Q8ND90 353 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 WHAMMQ8TF30 809 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 NSUN4Q96CB9 384 aaKnown RBP16.34■□□□□ 0.21
DDX56-205ENST00000433257 ANKRD2Q9GZV1 360 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 LRWD1Q9UFC0 647 aa16.34■□□□□ 0.21
DDX56-205ENST00000433257 KIAA0754O94854 1291 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 GUCY2CP25092 1073 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
DDX56-205ENST00000433257 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 SV2BQ7L1I2 683 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.2
DDX56-205ENST00000433257 SP8Q8IXZ3 490 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 RTKN2Q8IZC4 609 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 ARFGAP2Q8N6H7 521 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 C3orf20Q8ND61 904 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 BCAS4Q8TDM0 211 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 C7orf43Q8WVR3 580 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 ZMYND12Q9H0C1 365 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 NDST4Q9H3R1 872 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 ATP6V0A2Q9Y487 856 aa16.33■□□□□ 0.2
DDX56-205ENST00000433257 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
DDX56-205ENST00000433257 VGLL3A8MV65 326 aa16.32■□□□□ 0.2
DDX56-205ENST00000433257 RBAK-RBAKDNI3L0D1 243 aa16.32■□□□□ 0.2
DDX56-205ENST00000433257 GNA14O95837 355 aa16.32■□□□□ 0.2
DDX56-205ENST00000433257 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms