RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-209ENST00000431632 DNAH12Q6ZR08 3092 aa16.43■□□□□ 0.22
CSNK1E-209ENST00000431632 LARGE1O95461 756 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 CST5P28325 142 aaPredicted RBP16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 CCND2P30279 289 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 ADCY7P51828 1080 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 ACLYP53396 1101 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 MRPS9P82933 396 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 TTLL4Q14679 1199 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 LY6KQ17RY6 165 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 CPLX2Q6PUV4 134 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 NECAB1Q8N987 351 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 UPF2Q9HAU5 1272 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 PCDHA6Q9UN73 950 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 PHF24Q9UPV7 400 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 PCDHA8Q9Y5H6 950 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
CSNK1E-209ENST00000431632 FRMPD3Q5JV73 1810 aa16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 ADAMTS3O15072 1205 aa16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 ATN1P54259 1190 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 LRRC26Q2I0M4 334 aa16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 SLC39A5Q6ZMH5 540 aa16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-209ENST00000431632 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 NKRFO15226 690 aaKnown RBP eCLIP16.4■□□□□ 0.227e-9■■■□□ 16.7
CSNK1E-209ENST00000431632 EVI5O60447 810 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 CTDNEP1O95476 244 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 ASGR1P07306 291 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 PCSK9Q8NBP7 692 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 OR6J1Q8NGC5 347 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 ZMYND12Q9H0C1 365 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 TMEM260Q9NX78 707 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 VPS54Q9P1Q0 977 aa16.4■□□□□ 0.22
CSNK1E-209ENST00000431632 LRRC37A2A6NM11 1700 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 A0A1W2PQ45 241 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 A0A1W2PQY0 241 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 ESYT2A0FGR8 921 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 MOXD2PA6NHM9 499 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 CLK2P49760 499 aaKnown RBP16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 SP2Q02086 613 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 XRRA1Q6P2D8 792 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 TEX2Q8IWB9 1127 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 CCDC12Q8WUD4 166 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 PGBD1Q96JS3 809 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 AIFM3Q96NN9 605 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 C6orf50Q9HD87 102 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
CSNK1E-209ENST00000431632 CEP290O15078 2479 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 STAM2O75886 525 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 CDKL5O76039 1030 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 DEXIO95424 95 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 RABEP1Q15276 862 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 KCNV1Q6PIU1 500 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 GTF3C6Q969F1 213 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 VTI1AQ96AJ9 217 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 INPP4AQ96PE3 977 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 SH3GLB2Q9NR46 395 aa16.38■□□□□ 0.21
CSNK1E-209ENST00000431632 SPATA31C2B4DYI2 1134 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 ZEB2O60315 1214 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 GH1P01241 217 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 TGFB3P10600 412 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 GNA11P29992 359 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 NLRP5P59047 1200 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 ARHGAP1Q07960 439 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 SEMA3FQ13275 785 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 CXCL17Q6UXB2 119 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 C7orf61Q8IZ16 206 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 AFG1LQ8WV93 481 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 BCAS3Q9H6U6 928 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 NR2E3Q9Y5X4 410 aa16.37■□□□□ 0.21
CSNK1E-209ENST00000431632 A6NJR5 290 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 H0YGN5 161 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 SORBS3O60504 671 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 ITGB5P18084 799 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 ICAM3P32942 547 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 CPT1AP50416 773 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 RTP1P59025 263 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 AP3B2Q13367 1082 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 SNX17Q15036 470 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 MYSM1Q5VVJ2 828 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 CCDC148Q8NFR7 591 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 GLT1D1Q96MS3 346 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 ANO3Q9BYT9 981 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 EHMT1Q9H9B1 1298 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 ORC3Q9UBD5 711 aaPredicted RBP16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 ATP11BQ9Y2G3 1177 aa16.36■□□□□ 0.21
CSNK1E-209ENST00000431632 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms