RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 C8orf37Q96NL8 207 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 CEP89Q96ST8 783 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 MCMBPQ9BTE3 642 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 SPON2Q9BUD6 331 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 CCSER2Q9H7U1 834 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 JADE2Q9NQC1 790 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 PPP4R1LQ9P1A2 415 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 KIAA1522Q9P206 1035 aaPredicted RBP3.43□□□□□ -1.86
CDC40-204ENST00000431461 ZNF214Q9UL59 606 aaPredicted RBP3.43□□□□□ -1.86
CDC40-204ENST00000431461 TCAF1Q9Y4C2 921 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 PCSK5Q92824 1860 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 TRBV23OR9-2A0A075B6M9 112 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 UNCXA6NJT0 531 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 MUSKO15146 869 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 GPR42O15529 346 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 PPFIA2O75334 1257 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 GUCY2CP25092 1073 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 ERCC5P28715 1186 aaPredicted RBP3.42□□□□□ -1.86
CDC40-204ENST00000431461 ZC3H6P61129 1189 aaKnown RBP3.42□□□□□ -1.86
CDC40-204ENST00000431461 SF3A1Q15459 793 aaKnown RBP3.42□□□□□ -1.86
CDC40-204ENST00000431461 ZYXQ15942 572 aaKnown RBP3.42□□□□□ -1.86
CDC40-204ENST00000431461 WWC2Q6AWC2 1192 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 CIR1Q86X95 450 aaPredicted RBP3.42□□□□□ -1.86
CDC40-204ENST00000431461 KIAA0825Q8IV33 1275 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 IGDCC4Q8TDY8 1250 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 LCORQ96JN0 433 aaPredicted RBP3.42□□□□□ -1.86
CDC40-204ENST00000431461 ZDHHC15Q96MV8 337 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 PTPN18Q99952 460 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 WHRNQ9P202 907 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 GULP1Q9UBP9 304 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 STRIP2Q9ULQ0 834 aa3.42□□□□□ -1.86
CDC40-204ENST00000431461 C2orf71A6NGG8 1288 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 B4GALT3O60512 393 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 VAMP4O75379 141 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 NTRK1P04629 796 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 SEPHS1P49903 392 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 ABHD18Q0P651 414 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 PPP2R5DQ14738 602 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 CD300LDQ6UXZ3 194 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 ETV3LQ6ZN32 361 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 CPNE8Q86YQ8 564 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 MIB1Q86YT6 1006 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 USP33Q8TEY7 942 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 IGSF5Q9NSI5 407 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 BACE2Q9Y5Z0 518 aa3.41□□□□□ -1.86
CDC40-204ENST00000431461 C7orf72A4D263 438 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 PATE3B3GLJ2 98 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 SGSM2O43147 1006 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 NPHS1O60500 1241 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 CYP1A1P04798 512 aaPredicted RBP3.4□□□□□ -1.87
CDC40-204ENST00000431461 PAMP19021 973 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 LMO1P25800 156 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 NANOS3P60323 173 aaKnown RBP3.4□□□□□ -1.87
CDC40-204ENST00000431461 FOXE3Q13461 319 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 MIIPQ5JXC2 388 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 PRAMEF18Q5VWM3 479 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 IGFL4Q6B9Z1 124 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 RUFY4Q6ZNE9 571 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 NT5DC4Q86YG4 428 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 ARHGEF39Q8N4T4 335 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 SLC43A3Q8NBI5 491 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 PLEKHO2Q8TD55 490 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 RCC1LQ96I51 464 aaKnown RBP3.4□□□□□ -1.87
CDC40-204ENST00000431461 ZSWIM3Q96MP5 696 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 FERD3LQ96RJ6 166 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 KLHL25Q9H0H3 589 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 DDX41Q9UJV9 622 aaKnown RBP3.4□□□□□ -1.87
CDC40-204ENST00000431461 SLC12A7Q9Y666 1083 aa3.4□□□□□ -1.87
CDC40-204ENST00000431461 NPHP3-ACAD11A0A0J9YXS1 232 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 KRTAP29-1A8MX34 341 aaPredicted RBP3.39□□□□□ -1.87
CDC40-204ENST00000431461 STXBP3O00186 592 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 FUCA1P04066 466 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 EPHB4P54760 987 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 ITGA1P56199 1179 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 HDLBPQ00341 1268 aaKnown RBP3.39□□□□□ -1.87
CDC40-204ENST00000431461 AMPD2Q01433 879 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 GRB10Q13322 594 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 DPY19L1Q2PZI1 675 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 ZC3H18Q86VM9 953 aaKnown RBP3.39□□□□□ -1.87
CDC40-204ENST00000431461 METTL16Q86W50 562 aaKnown RBP3.39□□□□□ -1.87
CDC40-204ENST00000431461 DCP2Q8IU60 420 aaKnown RBP3.39□□□□□ -1.87
CDC40-204ENST00000431461 ARMC5Q96C12 935 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 SEC16BQ96JE7 1060 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 MMP19Q99542 508 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 HAUS7Q99871 368 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 GBP3Q9H0R5 595 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 CAPN10Q9HC96 672 aa3.39□□□□□ -1.87
CDC40-204ENST00000431461 NGRNQ9NPE2 291 aaKnown RBP3.39□□□□□ -1.87
CDC40-204ENST00000431461 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.39□□□□□ -1.87
CDC40-204ENST00000431461 ZNF623O75123 536 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 PPM1BO75688 479 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 ZNF28P17035 718 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 MCM7P33993 719 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 STAT5AP42229 794 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 GJA8P48165 433 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 INHBCP55103 352 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
CDC40-204ENST00000431461 PPP2CBP62714 309 aa3.38□□□□□ -1.87
CDC40-204ENST00000431461 PPP2CAP67775 309 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms