RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 KCNK18Q7Z418 384 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 RAB34Q9BZG1 259 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 WDR11Q9BZH6 1224 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 R3HDMLQ9H3Y0 253 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 MRPL11Q9Y3B7 192 aaKnown RBP12.66□□□□□ -0.38
SMPD4-205ENST00000431183 DOCK2Q92608 1830 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 SNHG28P0DPA3 235 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 ARP10275 920 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-205ENST00000431183 AS3MTQ9HBK9 375 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 SH3GLB2Q9NR46 395 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 EXOC1Q9NV70 894 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-205ENST00000431183 BMP15O95972 392 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 IREB2P48200 963 aaKnown RBP12.65□□□□□ -0.38
SMPD4-205ENST00000431183 MAP3K9P80192 1104 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 LRCH2Q5VUJ6 765 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 ZNF577Q9BSK1 485 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 XPO4Q9C0E2 1151 aaKnown RBP12.65□□□□□ -0.38
SMPD4-205ENST00000431183 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
SMPD4-205ENST00000431183 BACH1O14867 736 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 SLFN14P0C7P3 912 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 NLRP12P59046 1061 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 PSMC6P62333 389 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 MKL1Q969V6 931 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 UBASH3AP57075 661 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 GMCL1Q96IK5 515 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
SMPD4-205ENST00000431183 BMP6P22004 513 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 HERC4Q5GLZ8 1057 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-205ENST00000431183 GLIS3Q8NEA6 775 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 OPTNQ96CV9 577 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 BHMT2Q9H2M3 363 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 FEM1BQ9UK73 627 aa12.64□□□□□ -0.39
SMPD4-205ENST00000431183 SV2BQ7L1I2 683 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 KSR1Q8IVT5 923 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 COL20A1Q9P218 1284 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 GPBP1Q86WP2 473 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 TAB2Q9NYJ8 693 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 RPN1P04843 607 aaKnown RBP12.63□□□□□ -0.39
SMPD4-205ENST00000431183 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
SMPD4-205ENST00000431183 TRAPPC10P48553 1259 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 ECM1Q16610 540 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 GMCL1P1Q8NEA9 526 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 FUCA2Q9BTY2 467 aa12.63□□□□□ -0.39
SMPD4-205ENST00000431183 COG2Q14746 738 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 CCDC47Q96A33 483 aaKnown RBP12.62□□□□□ -0.39
SMPD4-205ENST00000431183 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-205ENST00000431183 HPSEQ9Y251 543 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 NAV1Q8NEY1 1877 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 ZBTB22O15209 634 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 LONP1P36776 959 aaKnown RBP12.62□□□□□ -0.39
SMPD4-205ENST00000431183 GALNT17Q6IS24 598 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 MTRQ99707 1265 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 ATRNL1Q5VV63 1379 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 MARK3P27448 753 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 MYL5Q02045 173 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 KMT5BQ4FZB7 885 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 DHX40Q8IX18 779 aaKnown RBP12.62□□□□□ -0.39
SMPD4-205ENST00000431183 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 HAS1Q92839 578 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 IKZF4Q9H2S9 585 aa12.62□□□□□ -0.39
SMPD4-205ENST00000431183 DDX60LQ5H9U9 1706 aaKnown RBP12.61□□□□□ -0.39
SMPD4-205ENST00000431183 GLTPD2A6NH11 291 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 VWA5AO00534 786 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 OPLAHO14841 1288 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 WDR46O15213 610 aaKnown RBP12.61□□□□□ -0.39
SMPD4-205ENST00000431183 MSH4O15457 936 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 FANCCQ00597 558 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 ANKRD13CQ8N6S4 541 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 DYDC2Q96IM9 177 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
SMPD4-205ENST00000431183 ABT1Q9ULW3 272 aaKnown RBP12.61□□□□□ -0.39
SMPD4-205ENST00000431183 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 USP14P54578 494 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 LARP4BQ92615 738 aaKnown RBP12.61□□□□□ -0.39
SMPD4-205ENST00000431183 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 EML1O00423 815 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 FSTL1Q12841 308 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 TMEM132BQ14DG7 1078 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 FKBP1CQ5VVH2 108 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 TCERG1LQ5VWI1 586 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 FAM160B2Q86V87 743 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 VPS33BQ9H267 617 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
SMPD4-205ENST00000431183 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
SMPD4-205ENST00000431183 IPO5O00410 1097 aaKnown RBP12.6□□□□□ -0.39
SMPD4-205ENST00000431183 N4BP3O15049 544 aa12.6□□□□□ -0.39
SMPD4-205ENST00000431183 MED24O75448 989 aa12.6□□□□□ -0.39
SMPD4-205ENST00000431183 SOX10P56693 466 aa12.6□□□□□ -0.39
SMPD4-205ENST00000431183 HUNKP57058 714 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms