RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 KIAA1211Q6ZU35 1233 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 EEPD1Q7L9B9 569 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 FAM160B2Q86V87 743 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 REPS2Q8NFH8 660 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 ALDH8A1Q9H2A2 487 aaPredicted RBP9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 BOLA2Q9H3K6 86 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 SLC38A10Q9HBR0 1119 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 VTA1Q9NP79 307 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 ADD3Q9UEY8 706 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 FAM50BQ9Y247 325 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 RIPK3Q9Y572 518 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 MTCH2Q9Y6C9 303 aa9.31□□□□□ -0.92
ECHDC1-207ENST00000430841 MUC6Q6W4X9 2439 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 PRRC2BQ5JSZ5 2229 aaKnown RBP9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 TCRBV5S4A2TA0A5A2 114 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 B4DLN1 442 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 TMEM232C9JQI7 657 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 SLC1A4P43007 532 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 MRPL12P52815 198 aaKnown RBP9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 CNTN2Q02246 1040 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 PDE4BQ07343 736 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 TTLL4Q14679 1199 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 CCDC96Q2M329 555 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 SLFN13Q68D06 897 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 CTR9Q6PD62 1173 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 SIAH1Q8IUQ4 282 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 FBXO16Q8IX29 292 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 OR6J1Q8NGC5 347 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 PHOSPHO2Q8TCD6 241 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 TRERF1Q96PN7 1200 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 NACAP1Q9BZK3 213 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 WNT8AQ9H1J5 351 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 CHMP4BQ9H444 224 aaKnown RBP9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 EPHX3Q9H6B9 360 aa9.3□□□□□ -0.92
ECHDC1-207ENST00000430841 TRANK1O15050 2925 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 A6NJR5 290 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 RFXAPO00287 272 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 ADCY6O43306 1168 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 GPR37L1O60883 481 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 BAIAP3O94812 1187 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 CYP2C9P11712 490 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 ALADP13716 330 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 GNAT2P19087 354 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 FOXC1Q12948 553 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 PPP2R5BQ15173 497 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 UBE3CQ15386 1083 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 ALYREFQ86V81 257 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 HERC6Q8IVU3 1022 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 RPAP2Q8IXW5 612 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 SLC43A3Q8NBI5 491 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 MTG1Q9BT17 334 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 A1CFQ9NQ94 594 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 CCPG1Q9ULG6 757 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 SYNPO2Q9UMS6 1093 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 MTMR7Q9Y216 660 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 Q9Y3F1 56 aa9.29□□□□□ -0.92
ECHDC1-207ENST00000430841 TANC1Q9C0D5 1861 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 PTPDC1A2A3K4 754 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 SMIM22K7EJ46 135 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 KPNA6O60684 536 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 SMPD1P17405 629 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 RASA1P20936 1047 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 EP400NLQ6ZTU2 488 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 FAM133AQ8N9E0 248 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 GMCL1P1Q8NEA9 526 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 CHMP4CQ96CF2 233 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 CEP95Q96GE4 821 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 TRMT13Q9NUP7 481 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 MTUS1Q9ULD2 1270 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 STX8Q9UNK0 236 aa9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 COL4A4P53420 1690 aaPredicted RBP9.28□□□□□ -0.92
ECHDC1-207ENST00000430841 CHD7Q9P2D1 2997 aa9.27□□□□□ -0.92
ECHDC1-207ENST00000430841 PRR33A8MZF0 331 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 NKRFO15226 690 aaKnown RBP eCLIP9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 EFCAB14O75071 495 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 PRDM1O75626 825 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 ADH1BP00325 375 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 SNRPBP14678 240 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 ATP5JP18859 108 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 POU3F3P20264 500 aaPredicted RBP9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 TAP1Q03518 808 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 GRB10Q13322 594 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 PTPROQ16827 1216 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 DUSP28Q4G0W2 176 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 SBK1Q52WX2 424 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 GDPD5Q8WTR4 605 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 HAUS7Q99871 368 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 WDR11Q9BZH6 1224 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 MTMR4Q9NYA4 1195 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 CTNNA3Q9UI47 895 aa9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 GNEQ9Y223 722 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-207ENST00000430841 GREB1LQ9C091 1923 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms